RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 CYP27B1O15528 508 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 PCCAP05165 728 aaPredicted RBP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 HOXD13P35453 343 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 GSK3AP49840 483 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 NDUFA8P51970 172 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 ETF1P62495 437 aaKnown RBP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 TPM4P67936 248 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 CLUL1Q15846 466 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 NBPF14Q5TI25 921 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 WDR73Q6P4I2 378 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 KRT28Q7Z3Y7 464 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 CPOQ8IVL8 374 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 NBPF15Q8N660 670 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 VGLL2Q8N8G2 317 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 FSIP1Q8NA03 581 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 SLC7A14Q8TBB6 771 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 TCEANC2Q96MN5 208 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 PIGSQ96S52 555 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 MMTAG2Q9BU76 263 aaKnown RBP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 TMEM120AQ9BXJ8 343 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 ARHGAP39Q9C0H5 1083 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 NACA2Q9H009 215 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 DDX18Q9NVP1 670 aaKnown RBP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 NSMCE4AQ9NXX6 385 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 CPSF2Q9P2I0 782 aaKnown RBP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 ZNF624Q9P2J8 865 aaPredicted RBP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 FHOD1Q9Y613 1164 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 MYH2Q9UKX2 1941 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 SYNJ2BP-COX16A0A087WUM0 186 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 USP27XA6NNY8 438 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 STX10O60499 249 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 CDKL5O76039 1030 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 ZNF202O95125 648 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 ADH1BP00325 375 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 TFE3P19532 575 aaPredicted RBP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 TNFSF4P23510 183 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 KRT9P35527 623 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 KIF11P52732 1056 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 GPR85P60893 370 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 PPARDQ03181 441 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 ANO4Q32M45 955 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 C5orf22Q49AR2 442 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 LBX2Q6XYB7 198 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 CCDC170Q8IYT3 715 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 USP38Q8NB14 1042 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 NEDD1Q8NHV4 660 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 ZBTB9Q96C00 473 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 ZNF845Q96IR2 970 aaPredicted RBP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 MENTQ9BUN1 341 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 DDX23Q9BUQ8 820 aaKnown RBP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 DNAI2Q9GZS0 605 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 C19orf44Q9H6X5 657 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 IFT22Q9H7X7 185 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 NMRK2Q9NPI5 230 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 WASH6PQ9NQA3 447 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 TRPV5Q9NQA5 729 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 HPF1Q9NWY4 346 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 ZHX1Q9UKY1 873 aaPredicted RBP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 RTCBQ9Y3I0 505 aaKnown RBP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 USP16Q9Y5T5 823 aa4.79□□□□□ -1.64
CLCA3P-202ENST00000466454 COL5A2P05997 1499 aaPredicted RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 SH2B2O14492 632 aaPredicted RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 RTN2O75298 545 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 PPFIA2O75334 1257 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 PGM3O95394 542 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 NR3C2P08235 984 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 PBX1P40424 430 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 CCNA1P78396 465 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 PWP1Q13610 501 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 KCNB1Q14721 858 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 MSS51Q4VC12 460 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 RPS26P11Q5JNZ5 115 aaPredicted RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 HGSNATQ68CP4 663 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 SPATA2LQ8IUW3 424 aaPredicted RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 PLD6Q8N2A8 252 aaKnown RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 IQUBQ8NA54 791 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 NCOA7Q8NI08 942 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 FATE1Q969F0 183 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 OSBP2Q969R2 916 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 LTV1Q96GA3 475 aaPredicted RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 FAXDC2Q96IV6 333 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 C16orf45Q96MC5 204 aaPredicted RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 TREX2Q9BQ50 279 aaPredicted RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 YIPF2Q9BWQ6 316 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 TEX13AQ9BXU3 409 aaPredicted RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 ZNF215Q9UL58 517 aaPredicted RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 USP20Q9Y2K6 914 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 GPSM3Q9Y4H4 160 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 SCN7AQ01118 1682 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 PCDH11XQ9BZA7 1347 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 PCDH11YQ9BZA8 1340 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 MYH6P13533 1939 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 TCRBV5S4A2TA0A5A2 114 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 ZSCAN5CA6NGD5 496 aaPredicted RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 B4DLN1 442 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 RNF223E7ERA6 249 aa4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 CACNB4O00305 520 aaPredicted RBP4.78□□□□□ -1.64
CLCA3P-202ENST00000466454 ARHGAP6O43182 974 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms