RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 ATG4AQ8WYN0 398 aa11.16□□□□□ -0.62
UFD1-206ENST00000466373 ZBTB45Q96K62 511 aaPredicted RBP11.16□□□□□ -0.62
UFD1-206ENST00000466373 FAM118BQ9BPY3 351 aa11.16□□□□□ -0.62
UFD1-206ENST00000466373 TXLNGYQ9BZA5 131 aa11.16□□□□□ -0.62
UFD1-206ENST00000466373 MAP3K20Q9NYL2 800 aaKnown RBP11.16□□□□□ -0.62
UFD1-206ENST00000466373 GTF3C4Q9UKN8 822 aa11.16□□□□□ -0.62
UFD1-206ENST00000466373 COQ4Q9Y3A0 265 aa11.16□□□□□ -0.62
UFD1-206ENST00000466373 STBD1O95210 358 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 CYP1A2P05177 515 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 HARSP12081 509 aaKnown RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 RRM1P23921 792 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 NLRP11P59045 1033 aaKnown RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 SNRPFP62306 86 aaKnown RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 SP2Q02086 613 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 FSTL1Q12841 308 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 IFT88Q13099 833 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 PPP1R7Q15435 360 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 RNF187Q5TA31 235 aaPredicted RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 B4GALNT4Q76KP1 1039 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 ZNF280CQ8ND82 737 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 NSUN6Q8TEA1 469 aaKnown RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 NTPCRQ9BSD7 190 aaKnown RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 PABPC3Q9H361 631 aaKnown RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 CYP26B1Q9NR63 512 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 DNAJC17Q9NVM6 304 aaKnown RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 CNOT7Q9UIV1 285 aaKnown RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 PCDHA3Q9Y5H8 950 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 COL11A1P12107 1806 aaPredicted RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 A0A087WUV0 522 aaPredicted RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 VGLL3A8MV65 326 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 PSAPP07602 524 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 CFHP08603 1231 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 MAPK4P31152 587 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 COILP38432 576 aaPredicted RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 RWDD2BP57060 319 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 QPCTQ16769 361 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 TTC31Q49AM3 519 aaPredicted RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 ZBTB41Q5SVQ8 909 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 ACAD10Q6JQN1 1059 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 SLC17A8Q8NDX2 589 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 IFT74Q96LB3 600 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 FBXL18Q96ME1 805 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 FNBP1Q96RU3 617 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 PICK1Q9NRD5 415 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 C1orf112Q9NSG2 853 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 ANKFY1Q9P2R3 1169 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 SLC9A2Q9UBY0 812 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 ZNF214Q9UL59 606 aaPredicted RBP11.15□□□□□ -0.62
UFD1-206ENST00000466373 MTUS1Q9ULD2 1270 aa11.15□□□□□ -0.62
UFD1-206ENST00000466373 DGAT1O75907 488 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 KIAA0754O94854 1291 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 FAM107AO95990 144 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 SCP2P22307 547 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 GJC1P36383 396 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 POLGP54098 1239 aaPredicted RBP11.15□□□□□ -0.63
UFD1-206ENST00000466373 IFI35P80217 286 aaPredicted RBP11.15□□□□□ -0.63
UFD1-206ENST00000466373 SF3B2Q13435 895 aaKnown RBP11.15□□□□□ -0.63
UFD1-206ENST00000466373 AGBL2Q5U5Z8 902 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 SCARA3Q6AZY7 606 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 OTUD6BQ8N6M0 293 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 SPIRE2Q8WWL2 714 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 RAPGEF5Q92565 580 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 GPRASP2Q96D09 838 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 SELENOSQ9BQE4 189 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 HEMGNQ9BXL5 484 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 AZI2Q9H6S1 392 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 ATP6V0A4Q9HBG4 840 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 A1CFQ9NQ94 594 aaKnown RBP11.15□□□□□ -0.63
UFD1-206ENST00000466373 PCYOX1Q9UHG3 505 aa11.15□□□□□ -0.63
UFD1-206ENST00000466373 PTPRJQ12913 1337 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 MYH9P35579 1960 aaKnown RBP11.14□□□□□ -0.63
UFD1-206ENST00000466373 GMNCA6NCL1 334 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 LRRIQ4A6NIV6 560 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 O00370 1275 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 PMM2O15305 246 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 MTA2O94776 668 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 PTPRAP18433 802 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 VPS41P49754 854 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 SIX1Q15475 284 aaPredicted RBP11.14□□□□□ -0.63
UFD1-206ENST00000466373 CLEC16AQ2KHT3 1053 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 SGO2Q562F6 1265 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 BRDTQ58F21 947 aaPredicted RBP11.14□□□□□ -0.63
UFD1-206ENST00000466373 DALRD3Q5D0E6 543 aaKnown RBP11.14□□□□□ -0.63
UFD1-206ENST00000466373 USP37Q86T82 979 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 TMC2Q8TDI7 906 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 EPS8L3Q8TE67 593 aaKnown RBP11.14□□□□□ -0.63
UFD1-206ENST00000466373 CYFIP2Q96F07 1278 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 CCDC113Q9H0I3 377 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 UVRAGQ9P2Y5 699 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 NFKBIEO00221 500 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 PODXLO00592 558 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 GJB6O95452 261 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 HSPA6P17066 643 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 NF2P35240 595 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 CCDC38Q502W7 563 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 FBXW10Q5XX13 1052 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 SEPT14Q6ZU15 432 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 SCYL3Q8IZE3 742 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 SAMD3Q8N6K7 520 aa11.14□□□□□ -0.63
UFD1-206ENST00000466373 MCPH1Q8NEM0 835 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms