RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 SNTG2Q9NY99 539 aa14.91□□□□□ -0.02
CHD3-207ENST00000466233 FBXL21Q9UKT6 434 aa14.91□□□□□ -0.02
CHD3-207ENST00000466233 KIF3AQ9Y496 699 aa14.91□□□□□ -0.02
CHD3-207ENST00000466233 BACE2Q9Y5Z0 518 aa14.91□□□□□ -0.02
CHD3-207ENST00000466233 TDRD15B5MCY1 1934 aaKnown RBP14.91□□□□□ -0.02
CHD3-207ENST00000466233 XYLBO75191 536 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 KIF4AO95239 1232 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 FGFR3P22607 806 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 CCT6AP40227 531 aaKnown RBP14.9□□□□□ -0.02
CHD3-207ENST00000466233 GNL2Q13823 731 aaKnown RBP14.9□□□□□ -0.02
CHD3-207ENST00000466233 PSMD5Q16401 504 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 TMEM132AQ24JP5 1023 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 LIN9Q5TKA1 542 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 ATF7IP2Q5U623 682 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 ALKAL1Q6UXT8 129 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 CCDC83Q8IWF9 413 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 KCNN1Q92952 543 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 DRC1Q96MC2 740 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 PPP1R10Q96QC0 940 aaKnown RBP14.9□□□□□ -0.02
CHD3-207ENST00000466233 MYADMQ96S97 322 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 KCNH3Q9ULD8 1083 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 DNM3Q9UQ16 869 aa14.9□□□□□ -0.02
CHD3-207ENST00000466233 A0A087WWV3 80 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 TTLL13PA6NNM8 815 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 SCP2P22307 547 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 GRM5P41594 1212 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 GUCY1B3Q02153 619 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 HTR4Q13639 388 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 UPP1Q16831 310 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 KRT79Q5XKE5 535 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 ANKS3Q6ZW76 656 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 MTSS1LQ765P7 747 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 SIX5Q8N196 739 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 FEZF2Q8TBJ5 459 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 PAAF1Q9BRP4 392 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 PTPRHQ9HD43 1115 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 AVENQ9NQS1 362 aaPredicted RBP14.89□□□□□ -0.03
CHD3-207ENST00000466233 KCND2Q9NZV8 630 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 ARHGAP28Q9P2N2 729 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 MTRRQ9UBK8 725 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 CDH7Q9ULB5 785 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 MAFFQ9ULX9 164 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 KIAA1024Q9UPX6 916 aa14.89□□□□□ -0.03
CHD3-207ENST00000466233 MTCL1Q9Y4B5 1905 aaKnown RBP14.88□□□□□ -0.03
CHD3-207ENST00000466233 C2orf16Q68DN1 1984 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 CASTOR2A6NHX0 329 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 SLC26A4O43511 780 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 B3GAT3O94766 335 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 SEC24BO95487 1268 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 SPATA31D3P0C874 917 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 FSHRP23945 695 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 RPL9P32969 192 aaKnown RBP14.88□□□□□ -0.03
CHD3-207ENST00000466233 YARSP54577 528 aaKnown RBP14.88□□□□□ -0.03
CHD3-207ENST00000466233 PTGDRQ13258 359 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 DMP1Q13316 513 aaPredicted RBP14.88□□□□□ -0.03
CHD3-207ENST00000466233 ECM1Q16610 540 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 PPM1LQ5SGD2 360 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 NT5DC1Q5TFE4 455 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 PRSS55Q6UWB4 352 aaPredicted RBP14.88□□□□□ -0.03
CHD3-207ENST00000466233 SPATA31D4Q6ZUB0 917 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 DTWD2Q8NBA8 298 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 FLCNQ8NFG4 579 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 SHDQ96IW2 340 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 B3GALT6Q96L58 329 aa14.88□□□□□ -0.03
CHD3-207ENST00000466233 ACO2Q99798 780 aaKnown RBP14.88□□□□□ -0.03
CHD3-207ENST00000466233 CCDC94Q9BW85 323 aaPredicted RBP14.88□□□□□ -0.03
CHD3-207ENST00000466233 MRPL4Q9BYD3 311 aaKnown RBP14.88□□□□□ -0.03
CHD3-207ENST00000466233 DDX19AQ9NUU7 478 aaKnown RBP14.88□□□□□ -0.03
CHD3-207ENST00000466233 ZFHX2Q9C0A1 2572 aaPredicted RBP14.87□□□□□ -0.03
CHD3-207ENST00000466233 C8AP07357 584 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 MCF2P10911 925 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 KCNE1P15382 129 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 RPL17P18621 184 aaKnown RBP14.87□□□□□ -0.03
CHD3-207ENST00000466233 PROZP22891 400 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 GUCY2CP25092 1073 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 NPTX2P47972 431 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 TOB1P50616 345 aaPredicted RBP14.87□□□□□ -0.03
CHD3-207ENST00000466233 FOSBP53539 338 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 RILPL1Q5EBL4 403 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 HYIQ5T013 277 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 EEF1DP3Q658K8 133 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 RSPO2Q6UXX9 243 aaPredicted RBP14.87□□□□□ -0.03
CHD3-207ENST00000466233 DTHD1Q6ZMT9 781 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 CEP57Q86XR8 500 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 SNX29Q8TEQ0 813 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 SPIRE2Q8WWL2 714 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 NKD2Q969F2 451 aaPredicted RBP14.87□□□□□ -0.03
CHD3-207ENST00000466233 KIF2CQ99661 725 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 USP34Q70CQ2 3546 aa14.87□□□□□ -0.03
CHD3-207ENST00000466233 PLXNA3P51805 1871 aa14.86□□□□□ -0.03
CHD3-207ENST00000466233 SMIM28A0A1B0GU29 152 aa14.86□□□□□ -0.03
CHD3-207ENST00000466233 KRBA1A5PL33 1030 aa14.86□□□□□ -0.03
CHD3-207ENST00000466233 PRR23AA6NEV1 266 aa14.86□□□□□ -0.03
CHD3-207ENST00000466233 H0YCG3 227 aa14.86□□□□□ -0.03
CHD3-207ENST00000466233 SYN3O14994 580 aa14.86□□□□□ -0.03
CHD3-207ENST00000466233 MICAL2O94851 1124 aa14.86□□□□□ -0.03
CHD3-207ENST00000466233 EDN1P05305 212 aa14.86□□□□□ -0.03
CHD3-207ENST00000466233 STARD6P59095 220 aa14.86□□□□□ -0.03
CHD3-207ENST00000466233 FOXK2Q01167 660 aa14.86□□□□□ -0.03
CHD3-207ENST00000466233 ARL6IP4Q66PJ3 421 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms