RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 PROP1O75360 226 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 FKBP9O95302 570 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 CACNA2D1P54289 1103 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 RAP2BP61225 183 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 SIM1P81133 766 aaPredicted RBP3.25□□□□□ -1.89
CCDC93-205ENST00000466171 MFSD14BQ5SR56 506 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 METRNLQ641Q3 311 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 FKBP9P1Q75LS8 142 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 HOMER1Q86YM7 354 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 SRRM1Q8IYB3 904 aaKnown RBP3.25□□□□□ -1.89
CCDC93-205ENST00000466171 ACTRT2Q8TDY3 377 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 CEP95Q96GE4 821 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 FUBP3Q96I24 572 aaKnown RBP eCLIP3.25□□□□□ -1.89
CCDC93-205ENST00000466171 BOD1Q96IK1 185 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 FEZ1Q99689 392 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 KCTD10Q9H3F6 313 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 SPTLC3Q9NUV7 552 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 KLHL11Q9NVR0 708 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 MOCS1Q9NZB8 636 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 TMPRSS11EQ9UL52 423 aa3.25□□□□□ -1.89
CCDC93-205ENST00000466171 A0A1B0GTW7 788 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 CXorf49A8MYA2 514 aaPredicted RBP3.24□□□□□ -1.89
CCDC93-205ENST00000466171 PROB1E7EW31 1015 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 RBMXL2O75526 392 aaKnown RBP3.24□□□□□ -1.89
CCDC93-205ENST00000466171 GPANK1O95872 356 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 POMCP01189 267 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 CANXP27824 592 aaKnown RBP3.24□□□□□ -1.89
CCDC93-205ENST00000466171 ABCG1P45844 678 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 LGALS4P56470 323 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 TRIM25Q14258 630 aaKnown RBP3.24□□□□□ -1.89
CCDC93-205ENST00000466171 UGT8Q16880 541 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 AKNAD1Q5T1N1 836 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 ZNF572Q7Z3I7 529 aaPredicted RBP3.24□□□□□ -1.89
CCDC93-205ENST00000466171 RASSF3Q86WH2 238 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 THNSL2Q86YJ6 484 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 SLC41A1Q8IVJ1 513 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 COLGALT2Q8IYK4 626 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 NINJ1Q92982 152 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 FUBP1Q96AE4 644 aaKnown RBP3.24□□□□□ -1.89
CCDC93-205ENST00000466171 UHRF1Q96T88 793 aaPredicted RBP3.24□□□□□ -1.89
CCDC93-205ENST00000466171 NEU1Q99519 415 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 ZSWIM4Q9H7M6 989 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 TMEM74BQ9NUR3 256 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 RNF7Q9UBF6 113 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 MTO1Q9Y2Z2 717 aaKnown RBP3.24□□□□□ -1.89
CCDC93-205ENST00000466171 CD2APQ9Y5K6 639 aa3.24□□□□□ -1.89
CCDC93-205ENST00000466171 LCHNA4D1U4 455 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 AKR1B10O60218 316 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 ERN1O75460 977 aaKnown RBP3.23□□□□□ -1.89
CCDC93-205ENST00000466171 MATN4O95460 622 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 LPLP06858 475 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 ELANEP08246 267 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 IL2RBP14784 551 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 CTGFP29279 349 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 ADSLP30566 484 aaPredicted RBP3.23□□□□□ -1.89
CCDC93-205ENST00000466171 PER3P56645 1201 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 KRTAP10-6P60371 365 aaPredicted RBP3.23□□□□□ -1.89
CCDC93-205ENST00000466171 CXADRP78310 365 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 SCAPQ12770 1279 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 FOXF2Q12947 444 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 SP140Q13342 867 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 MST1LQ2TV78 715 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 CT83Q5H943 113 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 PITRM1Q5JRX3 1037 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 BROXQ5VW32 411 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 KIAA1614Q5VZ46 1190 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 B3GNTL1Q67FW5 361 aaPredicted RBP3.23□□□□□ -1.89
CCDC93-205ENST00000466171 GRASPQ7Z6J2 395 aaPredicted RBP3.23□□□□□ -1.89
CCDC93-205ENST00000466171 LYSMD2Q8IV50 215 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 NIM1KQ8IY84 436 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 OR7D4Q8NG98 312 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 SLC35B2Q8TB61 432 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 KAT6AQ92794 2004 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 SLC5A5Q92911 643 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 PTCD3Q96EY7 689 aaKnown RBP3.23□□□□□ -1.89
CCDC93-205ENST00000466171 RAX2Q96IS3 184 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 ACAP3Q96P50 834 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 AIFM2Q9BRQ8 373 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 MS4A5Q9H3V2 200 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 BCO1Q9HAY6 547 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 KCNE5Q9UJ90 142 aa3.23□□□□□ -1.89
CCDC93-205ENST00000466171 SALL3Q9BXA9 1300 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 CCDC151A5D8V7 595 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 DNAJC9-AS1A6NH13 148 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 ADCY6O43306 1168 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 PEX1O43933 1283 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 RAP2AP10114 183 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 ATP5JP18859 108 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 FGFR4P22455 802 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 GCSHP23434 173 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 ECHS1P30084 290 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 ADCYAP1R1P41586 468 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 OCA2Q04671 838 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 SRSF4Q08170 494 aaKnown RBP3.22□□□□□ -1.89
CCDC93-205ENST00000466171 PCBP1Q15365 356 aaKnown RBP eCLIP3.22□□□□□ -1.89
CCDC93-205ENST00000466171 C21orf62-AS1Q17RA5 79 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 C16orf86Q6ZW13 317 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 PTF1AQ7RTS3 328 aa3.22□□□□□ -1.89
CCDC93-205ENST00000466171 TRMT2AQ8IZ69 625 aaKnown RBP3.22□□□□□ -1.89
CCDC93-205ENST00000466171 GPR156Q8NFN8 814 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms