RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 SMG7Q92540 1137 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 MRPS27Q92552 414 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ANKS1AQ92625 1134 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SYN2Q92777 582 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TRIM63Q969Q1 353 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 NXPE3Q969Y0 559 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 COL26A1Q96A83 441 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 FERMT2Q96AC1 680 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 LRRC59Q96AG4 307 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 EME1Q96AY2 570 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PHF21AQ96BD5 680 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TRIM43Q96BQ3 446 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SYTL4Q96C24 671 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 MTFMTQ96DP5 389 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SLC47A1Q96FL8 570 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 OTUD5Q96G74 571 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 XAGE2Q96GT9 111 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SLC39A13Q96H72 371 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 DYDC2Q96IM9 177 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 HIC2Q96JB3 615 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 VPS39Q96JC1 886 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 VCPIP1Q96JH7 1222 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ZFYVE19Q96K21 471 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 DNAJC1Q96KC8 554 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PHACTR3Q96KR7 559 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CEP170P1Q96L14 293 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ART5Q96L15 291 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 IFT74Q96LB3 600 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ATP6V1G3Q96LB4 118 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CCDC138Q96M89 665 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 HS6ST2Q96MM7 605 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PRICKLE1Q96MT3 831 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 AIFM3Q96NN9 605 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 RPRD1AQ96P16 312 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 NOX5Q96PH1 765 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TMEM237Q96Q45 408 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 VPS35Q96QK1 796 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TUBGCP5Q96RT8 1024 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 GAS2L1Q99501 681 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 EYA1Q99502 592 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CGREF1Q99674 301 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PIP5K1AQ99755 562 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 GAL3ST1Q99999 423 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 C19orf43Q9BQ61 176 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 USB1Q9BQ65 265 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 BCL7BQ9BQE9 202 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 NUDT16L1Q9BRJ7 211 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ZKSCAN3Q9BRR0 538 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 NTPCRQ9BSD7 190 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TINF2Q9BSI4 451 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 RBM42Q9BTD8 480 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 EFHD1Q9BUP0 239 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 MLPHQ9BV36 600 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ACAT2Q9BWD1 397 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CDADC1Q9BWV3 514 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 LSM14BQ9BX40 385 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 BTBD2Q9BX70 525 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TBC1D10AQ9BXI6 508 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SLC26A6Q9BXS9 759 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TEX12Q9BXU0 123 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 FRMD8Q9BZ67 464 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 UPF3BQ9BZI7 483 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CRNKL1Q9BZJ0 848 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 UBXN6Q9BZV1 441 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 FTOQ9C0B1 505 aaKnown RBP eCLIP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TINAGL1Q9GZM7 467 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 PITHD1Q9GZP4 211 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SENP6Q9GZR1 1112 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ADAM19Q9H013 955 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 RNF38Q9H0F5 515 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 INTS2Q9H0H0 1204 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 KLHL25Q9H0H3 589 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 STMN4Q9H169 189 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 GBA3Q9H227 469 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 TMEM245Q9H330 911 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 GOLPH3LQ9H4A5 285 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 OSGEPL1Q9H4B0 414 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 RAD21L1Q9H4I0 556 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 SMARCAD1Q9H4L7 1026 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 RUBCNLQ9H714 662 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 C12orf49Q9H741 205 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ELAC1Q9H777 363 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 C8orf33Q9H7E9 229 aaPredicted RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ACAD9Q9H845 621 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CAAP1Q9H8G2 361 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 GORASP2Q9H8Y8 452 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 MARCH7Q9H992 704 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 COG4Q9H9E3 785 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 LIN28AQ9H9Z2 209 aaKnown RBP0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 EBF2Q9HAK2 575 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 C12orf10Q9HB07 376 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 FANCEQ9HB96 536 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CYP4F11Q9HBI6 524 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CRLF2Q9HC73 371 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ZFYVE28Q9HCC9 887 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 NEUROD4Q9HD90 331 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 ABCB6Q9NP58 842 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 VTA1Q9NP79 307 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 NLRC4Q9NPP4 1024 aa0.96□□□□□ -2.26
RPL39P28-201ENST00000465655 CD93Q9NPY3 652 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms