RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 KCNH6Q9H252 994 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 EPC1Q9H2F5 836 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 YTHDC2Q9H6S0 1430 aaKnown RBP4.11□□□□□ -1.75
CD55-207ENST00000465534 ADGRL3Q9HAR2 1447 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 POLR3BQ9NW08 1133 aaPredicted RBP4.11□□□□□ -1.75
CD55-207ENST00000465534 KCMF1Q9P0J7 381 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 BCCIPQ9P287 314 aaKnown RBP eCLIP4.11□□□□□ -1.75
CD55-207ENST00000465534 INSL6Q9Y581 213 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 POLR2AP24928 1970 aaKnown RBP4.11□□□□□ -1.75
CD55-207ENST00000465534 SBF2Q86WG5 1849 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 SPATA31A5Q5VU36 1347 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 SPATA31A7Q8IWB4 1347 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 RPTORQ8N122 1335 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 WASHC2CQ9Y4E1 1318 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 PDPK1O15530 556 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 EFCAB14O75071 495 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 KIR2DL3P43628 341 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 TXNRD1Q16881 649 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 ERCC6LQ2NKX8 1250 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 SP5Q6BEB4 398 aaPredicted RBP4.11□□□□□ -1.75
CD55-207ENST00000465534 SLFN12LQ6IEE8 588 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 CC2D1AQ6P1N0 951 aaPredicted RBP4.11□□□□□ -1.75
CD55-207ENST00000465534 CCDC62Q6P9F0 684 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 HDGFL2Q7Z4V5 671 aaPredicted RBP4.11□□□□□ -1.75
CD55-207ENST00000465534 CMTR2Q8IYT2 770 aaKnown RBP4.11□□□□□ -1.75
CD55-207ENST00000465534 LCORLQ8N3X6 602 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 MAGEB10Q96LZ2 347 aaPredicted RBP4.11□□□□□ -1.75
CD55-207ENST00000465534 CPPED1Q9BRF8 314 aaPredicted RBP4.11□□□□□ -1.75
CD55-207ENST00000465534 SLC46A2Q9BY10 475 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 C14orf93Q9H972 538 aaKnown RBP4.11□□□□□ -1.75
CD55-207ENST00000465534 NDOR1Q9UHB4 597 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 PFDN2Q9UHV9 154 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 SYNPO2Q9UMS6 1093 aa4.11□□□□□ -1.75
CD55-207ENST00000465534 ERVK-7P63135 1459 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 PLEKHH2Q8IVE3 1493 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 COL11A2P13942 1736 aaPredicted RBP4.1□□□□□ -1.75
CD55-207ENST00000465534 CTTNBP2Q8WZ74 1663 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 RRBP1Q9P2E9 1410 aaKnown RBP4.1□□□□□ -1.75
CD55-207ENST00000465534 FLNBO75369 2602 aaKnown RBP4.1□□□□□ -1.75
CD55-207ENST00000465534 TRPM2O94759 1503 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 H0YGN5 161 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 ZNF185O15231 689 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 KRT38O76015 456 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 ZBTB48P10074 688 aaPredicted RBP4.1□□□□□ -1.75
CD55-207ENST00000465534 TYRP1P17643 537 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 AVPR1BP47901 424 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 PRR16Q569H4 304 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 CTU1Q7Z7A3 348 aaKnown RBP4.1□□□□□ -1.75
CD55-207ENST00000465534 NELL1Q92832 810 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 RPGRQ92834 1020 aaKnown RBP4.1□□□□□ -1.75
CD55-207ENST00000465534 CAVIN3Q969G5 261 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 MAML3Q96JK9 1138 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 TINF2Q9BSI4 451 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 SLC52A2Q9HAB3 445 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 SYBUQ9NX95 663 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 TRPM5Q9NZQ8 1165 aa4.1□□□□□ -1.75
CD55-207ENST00000465534 TESQ9UGI8 421 aaKnown RBP4.1□□□□□ -1.75
CD55-207ENST00000465534 EPN1Q9Y6I3 576 aaPredicted RBP4.1□□□□□ -1.75
CD55-207ENST00000465534 ZNF318Q5VUA4 2279 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 NPHP3Q7Z494 1330 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 OVOS2A0A0G2JMS6 1433 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 OVOS2A0A0J9YW53 1432 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 OVOS2Q6IE36 1432 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 SPATA31E1Q6ZUB1 1445 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 PAPPAQ13219 1627 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 LRRIQ1Q96JM4 1722 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 FMN2Q9NZ56 1722 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.09□□□□□ -1.75
CD55-207ENST00000465534 UBA6A0AVT1 1052 aaPredicted RBP4.09□□□□□ -1.75
CD55-207ENST00000465534 TMEM200CA6NKL6 621 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 MAFGO15525 162 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 APOBEC3AP31941 199 aaPredicted RBP4.09□□□□□ -1.75
CD55-207ENST00000465534 FNTBP49356 437 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 TTC38Q5R3I4 469 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 ARHGEF19Q8IW93 802 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 LILRA3Q8N6C8 439 aaPredicted RBP4.09□□□□□ -1.75
CD55-207ENST00000465534 GPR101Q96P66 508 aaPredicted RBP4.09□□□□□ -1.75
CD55-207ENST00000465534 BOCQ9BWV1 1114 aa4.09□□□□□ -1.75
CD55-207ENST00000465534 CPEB1Q9BZB8 566 aaKnown RBP4.09□□□□□ -1.75
CD55-207ENST00000465534 ABT1Q9ULW3 272 aaKnown RBP4.09□□□□□ -1.75
CD55-207ENST00000465534 MRPS23Q9Y3D9 190 aaKnown RBP4.09□□□□□ -1.75
CD55-207ENST00000465534 C1orf167Q5SNV9 1468 aa4.09□□□□□ -1.76
CD55-207ENST00000465534 CLSPNQ9HAW4 1339 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 HOXA3O43365 443 aaPredicted RBP4.08□□□□□ -1.76
CD55-207ENST00000465534 NCR1O76036 304 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 NPTXRO95502 500 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 CFBP00751 764 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 FAM153BP0C7A2 387 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 MAP2K2P36507 400 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 SEC24CP53992 1094 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 BCAR1P56945 870 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 FOXI1Q12951 378 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 RASGRF1Q13972 1273 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 PKN2Q16513 984 aaKnown RBP4.08□□□□□ -1.76
CD55-207ENST00000465534 PRAMEF9Q5VWM5 478 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 IQSEC1Q6DN90 963 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 BMP8AQ7Z5Y6 402 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 BOLLQ8N9W6 283 aaKnown RBP4.08□□□□□ -1.76
CD55-207ENST00000465534 UIMC1Q96RL1 719 aa4.08□□□□□ -1.76
CD55-207ENST00000465534 TUBGCP5Q96RT8 1024 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms