RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 C8AP07357 584 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 HNRNPA1P09651 372 aaKnown RBP eCLIP12.1□□□□□ -0.47
COL11A1-207ENST00000465209 SP9P0CG40 484 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 FSHRP23945 695 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 TXKP42681 527 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 PSMD5Q16401 504 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 DCLRE1AQ6PJP8 1040 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 POTEHQ6S545 545 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 CATSPER3Q86XQ3 398 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 DIS3L2Q8IYB7 885 aaKnown RBP12.1□□□□□ -0.47
COL11A1-207ENST00000465209 NECAB1Q8N987 351 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 WASF1Q92558 559 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 FGF13Q92913 245 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 SNTG2Q9NY99 539 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 CDH7Q9ULB5 785 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 USP20Q9Y2K6 914 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 SIT1Q9Y3P8 196 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 CITO14578 2027 aa12.1□□□□□ -0.47
COL11A1-207ENST00000465209 SHISA7A6NL88 538 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 TMEM189-UBE2V1I3L0A0 370 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 N4BP3O15049 544 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 JAK2O60674 1132 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 ANAPC15P60006 121 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 GPC5P78333 572 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 SPECC1Q5M775 1068 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 FAM171A1Q5VUB5 890 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 EEF1DP3Q658K8 133 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 RSPO2Q6UXX9 243 aaPredicted RBP12.09□□□□□ -0.47
COL11A1-207ENST00000465209 MAEAQ7L5Y9 396 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 C1orf210Q8IVY1 113 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 MCPH1Q8NEM0 835 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 ITFG1Q8TB96 612 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 RMDN1Q96DB5 314 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 PPP1R10Q96QC0 940 aaKnown RBP12.09□□□□□ -0.47
COL11A1-207ENST00000465209 POLR3CQ9BUI4 534 aaPredicted RBP12.09□□□□□ -0.47
COL11A1-207ENST00000465209 BRMS1Q9HCU9 246 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 TUFT1Q9NNX1 390 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 ZFHX4Q86UP3 3567 aa12.09□□□□□ -0.47
COL11A1-207ENST00000465209 STK25O00506 426 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 ACKR2O00590 384 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 CCL16O15467 120 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 PRKCBP05771 671 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 THP07101 528 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 FGFR3P22607 806 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 RBM25P49756 843 aaKnown RBP12.08□□□□□ -0.48
COL11A1-207ENST00000465209 RAB33AQ14088 237 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.08□□□□□ -0.48
COL11A1-207ENST00000465209 NOSTRINQ8IVI9 506 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 NPAS3Q8IXF0 933 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 SUMF1Q8NBK3 374 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 C3orf58Q8NDZ4 430 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 SLC7A14Q8TBB6 771 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 HCFC1R1Q9NWW0 138 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 MTRRQ9UBK8 725 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 NCOR2Q9Y618 2525 aa12.08□□□□□ -0.48
COL11A1-207ENST00000465209 KANSL1LA0AUZ9 987 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 CYP11B2P19099 503 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 ATP2B1P20020 1258 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 RPA1P27694 616 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 NAMPTP43490 491 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 ELAVL2Q12926 359 aaKnown RBP12.07□□□□□ -0.48
COL11A1-207ENST00000465209 PRPF4BQ13523 1007 aaKnown RBP12.07□□□□□ -0.48
COL11A1-207ENST00000465209 SNW1Q13573 536 aaKnown RBP12.07□□□□□ -0.48
COL11A1-207ENST00000465209 ANKRD1Q15327 319 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 MLF2Q15773 248 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-207ENST00000465209 ECM1Q16610 540 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 UPP1Q16831 310 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 SLC5A9Q2M3M2 681 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 PPM1LQ5SGD2 360 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 AXDND1Q5T1B0 1012 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-207ENST00000465209 NT5DC1Q5TFE4 455 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 LIN9Q5TKA1 542 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 MTSS1LQ765P7 747 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 CEP57Q86XR8 500 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 ZBTB8OSQ8IWT0 167 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 DDX27Q96GQ7 796 aaKnown RBP12.07□□□□□ -0.48
COL11A1-207ENST00000465209 CCDC43Q96MW1 224 aaKnown RBP12.07□□□□□ -0.48
COL11A1-207ENST00000465209 KIFC3Q9BVG8 833 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 C2orf40Q9H1Z8 148 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 DNMT3BQ9UBC3 853 aaKnown RBP12.07□□□□□ -0.48
COL11A1-207ENST00000465209 MTF2Q9Y483 593 aaPredicted RBP12.07□□□□□ -0.48
COL11A1-207ENST00000465209 F5P12259 2224 aa12.07□□□□□ -0.48
COL11A1-207ENST00000465209 TICRRQ7Z2Z1 1910 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 MED19A0JLT2 244 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-207ENST00000465209 NRG2O14511 850 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-207ENST00000465209 RFX1P22670 979 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 TKTP29401 623 aaKnown RBP12.06□□□□□ -0.48
COL11A1-207ENST00000465209 OR1D2P34982 312 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 CLCNKBP51801 687 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 PRKCQQ04759 706 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 SOX4Q06945 474 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-207ENST00000465209 FZD5Q13467 585 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 MAPK6Q16659 721 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 UVSSAQ2YD98 709 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 ZNF528Q3MIS6 628 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 XKR4Q5GH76 650 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 GLRA4Q5JXX5 417 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 PDXDC1Q6P996 788 aa12.06□□□□□ -0.48
COL11A1-207ENST00000465209 ZC3H14Q6PJT7 736 aaKnown RBP12.06□□□□□ -0.48
COL11A1-207ENST00000465209 PADI6Q6TGC4 694 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms