RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TWF2Q6IBS0 349 aaKnown RBP19.11■□□□□ 0.65
CPSF4-209ENST00000465132 DAW1Q8N136 415 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 KCNN1Q92952 543 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 TMEM169Q96HH4 297 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 PRRX2Q99811 253 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 BLZF1Q9H2G9 400 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 ADAM7Q9H2U9 754 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 CDH22Q9UJ99 828 aa19.11■□□□□ 0.65
CPSF4-209ENST00000465132 K7ENM7 598 aa19.1■□□□□ 0.65
CPSF4-209ENST00000465132 CXCL14O95715 111 aa19.1■□□□□ 0.65
CPSF4-209ENST00000465132 SKIP12755 728 aa19.1■□□□□ 0.65
CPSF4-209ENST00000465132 SP100P23497 879 aaPredicted RBP19.1■□□□□ 0.65
CPSF4-209ENST00000465132 PTPN5P54829 565 aa19.1■□□□□ 0.65
CPSF4-209ENST00000465132 NCKAP1LP55160 1127 aa19.1■□□□□ 0.65
CPSF4-209ENST00000465132 CACNB1Q02641 598 aaPredicted RBP19.1■□□□□ 0.65
CPSF4-209ENST00000465132 ITIH3Q06033 890 aa19.1■□□□□ 0.65
CPSF4-209ENST00000465132 HSP90AA2PQ14568 343 aaPredicted RBP19.1■□□□□ 0.65
CPSF4-209ENST00000465132 BMS1Q14692 1282 aaKnown RBP19.1■□□□□ 0.65
CPSF4-209ENST00000465132 KLHL40Q2TBA0 621 aa19.1■□□□□ 0.65
CPSF4-209ENST00000465132 FAM26FQ5R3K3 315 aa19.1■□□□□ 0.65
CPSF4-209ENST00000465132 TMEM173Q86WV6 379 aaPredicted RBP19.1■□□□□ 0.65
CPSF4-209ENST00000465132 LPPQ93052 612 aa19.1■□□□□ 0.65
CPSF4-209ENST00000465132 PIN4Q9Y237 131 aaKnown RBP19.1■□□□□ 0.65
CPSF4-209ENST00000465132 UBE4BO95155 1302 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 SFI1A8K8P3 1242 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 ZC3H11AO75152 810 aaKnown RBP eCLIP19.09■□□□□ 0.65
CPSF4-209ENST00000465132 RHOBTB3O94955 611 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 CA8P35219 290 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 STIM1Q13586 685 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 CCDC183Q5T5S1 534 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 CES5AQ6NT32 575 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 GLB1LQ6UWU2 654 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 CATSPER4Q7RTX7 472 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 HAUS6Q7Z4H7 955 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 ZBTB33Q86T24 672 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 SFR1Q86XK3 245 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 KSR1Q8IVT5 923 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 GRAMD1CQ8IYS0 662 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 VPS52Q8N1B4 723 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 TRIML1Q8N9V2 468 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 NECTIN4Q96NY8 510 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 ZBP1Q9H171 429 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 POMKQ9H5K3 350 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 TMEM206Q9H813 350 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 IFT122Q9HBG6 1241 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 FAM105AQ9NUU6 356 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 TBC1D13Q9NVG8 400 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 ARHGAP28Q9P2N2 729 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 NR2E1Q9Y466 385 aa19.09■□□□□ 0.65
CPSF4-209ENST00000465132 CARNS1A5YM72 827 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 MEIS3P2A8K0S8 358 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 EIF3DO15371 548 aaKnown RBP eCLIP19.08■□□□□ 0.64
CPSF4-209ENST00000465132 ZNF623O75123 536 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 RAB27AP51159 221 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 PNOCQ13519 176 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 FAM187BQ17R55 369 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 TMEM132AQ24JP5 1023 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 NOMO2Q5JPE7 1267 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 PPP4R3CPQ6ZMV5 832 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 ZNF720Q7Z2F6 126 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 DDX53Q86TM3 631 aaKnown RBP19.08■□□□□ 0.64
CPSF4-209ENST00000465132 GPT2Q8TD30 523 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 AUTS2Q8WXX7 1259 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 CCDC51Q96ER9 411 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 IGSF21Q96ID5 467 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 PHOX2BQ99453 314 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 NRDE2Q9H7Z3 1164 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 KIAA1468Q9P260 1216 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 IRAK3Q9Y616 596 aa19.08■□□□□ 0.64
CPSF4-209ENST00000465132 WDFY4Q6ZS81 3184 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.07■□□□□ 0.64
CPSF4-209ENST00000465132 ACKR2O00590 384 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 SLC16A4O15374 487 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 OFD1O75665 1012 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 GCNT3O95395 438 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 GALTP07902 379 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 VCPP55072 806 aaKnown RBP19.07■□□□□ 0.64
CPSF4-209ENST00000465132 GTF2BQ00403 316 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 TCF15Q12870 199 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 PRPF4BQ13523 1007 aaKnown RBP19.07■□□□□ 0.64
CPSF4-209ENST00000465132 KMT5BQ4FZB7 885 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 NT5DC1Q5TFE4 455 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 KREMEN2Q8NCW0 462 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 TMEM161BQ8NDZ6 487 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 SPATA20Q8TB22 786 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 BCL7CQ8WUZ0 217 aaPredicted RBP19.07■□□□□ 0.64
CPSF4-209ENST00000465132 ACCSQ96QU6 501 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 MRPL4Q9BYD3 311 aaKnown RBP19.07■□□□□ 0.64
CPSF4-209ENST00000465132 DZANK1Q9NVP4 752 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 INPP5FQ9Y2H2 1132 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 PCDHA5Q9Y5H7 936 aa19.07■□□□□ 0.64
CPSF4-209ENST00000465132 C2CD4DB7Z1M9 353 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 PRKCBP05771 671 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 CTSAP10619 480 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 MTHFRP42898 656 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 SNRPFP62306 86 aaKnown RBP19.06■□□□□ 0.64
CPSF4-209ENST00000465132 RNASELQ05823 741 aaKnown RBP19.06■□□□□ 0.64
CPSF4-209ENST00000465132 MBTD1Q05BQ5 628 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 NFKBIBQ15653 356 aa19.06■□□□□ 0.64
CPSF4-209ENST00000465132 CAMK4Q16566 473 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms