RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MEA1Q16626 185 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 MIIPQ5JXC2 388 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 TRPM8Q7Z2W7 1104 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 GPD1LQ8N335 351 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 GBP7Q8N8V2 638 aaPredicted RBP9.63□□□□□ -0.87
HPS4-208ENST00000464362 CDHR1Q96JP9 859 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 NCAPGQ9BPX3 1015 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 TARS2Q9BW92 718 aaKnown RBP9.63□□□□□ -0.87
HPS4-208ENST00000464362 RPF1Q9H9Y2 349 aaKnown RBP9.63□□□□□ -0.87
HPS4-208ENST00000464362 PFASO15067 1338 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 SLC16A3O15427 465 aaKnown RBP9.63□□□□□ -0.87
HPS4-208ENST00000464362 HOXA7P31268 230 aaPredicted RBP9.63□□□□□ -0.87
HPS4-208ENST00000464362 OVGP1Q12889 678 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 ORC1Q13415 861 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 LRRC36Q1X8D7 754 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 GRAMD1BQ3KR37 738 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 FAM102AQ5T9C2 384 aaPredicted RBP9.63□□□□□ -0.87
HPS4-208ENST00000464362 SPATA24Q86W54 205 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 SLC17A8Q8NDX2 589 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 NSUN6Q8TEA1 469 aaKnown RBP9.63□□□□□ -0.87
HPS4-208ENST00000464362 KAT5Q92993 513 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 SPDL1Q96EA4 605 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 CALR3Q96L12 384 aaKnown RBP9.63□□□□□ -0.87
HPS4-208ENST00000464362 FAM161BQ96MY7 647 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 MCEEQ96PE7 176 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 NUDCD1Q96RS6 583 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 CARD9Q9H257 536 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 PFDN4Q9NQP4 134 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 FEM1BQ9UK73 627 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 SIK3Q9Y2K2 1263 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 EML1O00423 815 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 DDX3XO00571 662 aaKnown RBP eCLIP9.63□□□□□ -0.87
HPS4-208ENST00000464362 AGTP01019 485 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 CPA2P48052 419 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 CDH6P55285 790 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 ASPHQ12797 758 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 CCDC125Q86Z20 511 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 RNF149Q8NC42 400 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.63□□□□□ -0.87
HPS4-208ENST00000464362 MIPOL1Q8TD10 442 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 PABPC3Q9H361 631 aaKnown RBP9.63□□□□□ -0.87
HPS4-208ENST00000464362 UNC45AQ9H3U1 944 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 USP15Q9Y4E8 981 aaPredicted RBP9.63□□□□□ -0.87
HPS4-208ENST00000464362 PCDHAC2Q9Y5I4 1007 aa9.63□□□□□ -0.87
HPS4-208ENST00000464362 HAUS5O94927 633 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 SETSIPP0DME0 302 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 RPS6KA2Q15349 733 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 KDM7AQ6ZMT4 941 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 SLC47A2Q86VL8 602 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 SLC13A5Q86YT5 568 aaPredicted RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 CCDC33Q8N5R6 958 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 FAM81BQ96LP2 452 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 FGFBP2Q9BYJ0 223 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 VPS11Q9H270 941 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 RPAP3Q9H6T3 665 aaPredicted RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 DLG5Q8TDM6 1919 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 CCT8L1PA6NM43 557 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 F8VZ95 297 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 M0QYV0 167 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 CDH16O75309 829 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 PPFIA2O75334 1257 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 GSTA1P08263 222 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 GSTA2P09210 222 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 PRLRP16471 622 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 COILP38432 576 aaPredicted RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 RGS7P49802 495 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 RPS6P62753 249 aaKnown RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 IFI35P80217 286 aaPredicted RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 MRPS9P82933 396 aaKnown RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 KDSRQ06136 332 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 TTMPQ5BVD1 217 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 TAS1R2Q8TE23 839 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 CCT6BQ92526 530 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 SLC35C1Q96A29 364 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 PPP1R36Q96LQ0 422 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 KCND1Q9NSA2 647 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 CHMP2BQ9UQN3 213 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 NEU2Q9Y3R4 380 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 NUB1Q9Y5A7 615 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 ZNF263O14978 683 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 HLA-DRAP01903 254 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 NOP14P78316 857 aaKnown RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 KCNMA1Q12791 1236 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 BIRC2Q13490 618 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 TAF12Q16514 161 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 SHROOM1Q2M3G4 852 aaPredicted RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 KCNT1Q5JUK3 1230 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 FAXCQ5TGI0 409 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 SLFN12LQ6IEE8 588 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 PIP4K2CQ8TBX8 421 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 ATP8B4Q8TF62 1192 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 AENQ8WTP8 325 aaKnown RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 DEPDC1BQ8WUY9 529 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 SYN2Q92777 582 aaPredicted RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 ARHGEF26Q96DR7 871 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 TAAR1Q96RJ0 339 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 AFG3L2Q9Y4W6 797 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 TNS2Q63HR2 1409 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 IQANK1A0A1B0GTG1 560 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 IGF2BP3O00425 579 aaKnown RBP eCLIP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms