RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 TDGQ13569 410 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 HYIQ5T013 277 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 FAM171A1Q5VUB5 890 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 MCTP1Q6DN14 999 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 RINT1Q6NUQ1 792 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 SMG7Q92540 1137 aaKnown RBP15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 UROC1Q96N76 676 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 PPP1R10Q96QC0 940 aaKnown RBP15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 ACO2Q99798 780 aaKnown RBP15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 NTPCRQ9BSD7 190 aaKnown RBP15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 MRPL4Q9BYD3 311 aaKnown RBP15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 PRKD2Q9BZL6 878 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 IRF2BPLQ9H1B7 796 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 UPF2Q9HAU5 1272 aaKnown RBP15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 KCNK12Q9HB15 430 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 PTPRHQ9HD43 1115 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 CACNG4Q9UBN1 327 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 GDAQ9Y2T3 454 aa15.79■□□□□ 0.12
SNRNP40-203ENST00000463988 PDGFBP01127 241 aaPredicted RBP15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 SPATA31D3P0C874 917 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 RPL17P18621 184 aaKnown RBP15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 GUCY2CP25092 1073 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 CDC25AP30304 524 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 GRM5P41594 1212 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 TCF15Q12870 199 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 MAPK7Q13164 816 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 XKR4Q5GH76 650 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 ARL6IP4Q66PJ3 421 aaKnown RBP15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 DCLRE1AQ6PJP8 1040 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 PRSS55Q6UWB4 352 aaPredicted RBP15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 SPATA31D4Q6ZUB0 917 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 LNX1Q8TBB1 728 aaPredicted RBP15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 CLSTN3Q9BQT9 956 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 RUSC1Q9BVN2 902 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 CCDC94Q9BW85 323 aaPredicted RBP15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 CXCL16Q9H2A7 254 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 SMOC2Q9H3U7 446 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 KMT5AQ9NQR1 393 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 TOPORSQ9NS56 1045 aaPredicted RBP15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 KCND2Q9NZV8 630 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 EPS15L1Q9UBC2 864 aa15.78■□□□□ 0.12
SNRNP40-203ENST00000463988 H3BQV1 296 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 N4BP1O75113 896 aaKnown RBP15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 ZMYND10O75800 440 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 FGFR3P22607 806 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 GJB2P29033 226 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 PSMD5Q16401 504 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 ALKAL1Q6UXT8 129 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 KCNK18Q7Z418 384 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 HASPINQ8TF76 798 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 SPIRE2Q8WWL2 714 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 NXPE3Q969Y0 559 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 CDT1Q9H211 546 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 PIDD1Q9HB75 910 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 FBXW11Q9UKB1 542 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 DUSP12Q9UNI6 340 aa15.77■□□□□ 0.12
SNRNP40-203ENST00000463988 SMIM28A0A1B0GU29 152 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 SLC26A4O43511 780 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 TRAPPC3O43617 180 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 B3GAT3O94766 335 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 HNRNPA1P09651 372 aaKnown RBP eCLIP15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 MCF2P10911 925 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 PROZP22891 400 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 GBP2P32456 591 aaPredicted RBP15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 CLCN5P51795 746 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 YARSP54577 528 aaKnown RBP15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 UPP1Q16831 310 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 ZNF568Q3ZCX4 644 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 RTL10Q7L3V2 364 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 TAS1R3Q7RTX0 852 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 CEP57Q86XR8 500 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 GLYCTKQ8IVS8 523 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 SYT2Q8N9I0 419 aaPredicted RBP15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 DDX27Q96GQ7 796 aaKnown RBP15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 SLC38A7Q9NVC3 462 aa15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 ZFHX2Q9C0A1 2572 aaPredicted RBP15.76■□□□□ 0.11
SNRNP40-203ENST00000463988 ABLIM1O14639 778 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 GALR2O43603 387 aaPredicted RBP15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 CD2BP2O95400 341 aaKnown RBP15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 POU2F2P09086 479 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 MYBP10242 640 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 PLS3P13797 630 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 HOXA9P31269 272 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 CLCNKBP51801 687 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 SMTNP53814 917 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 RAB33AQ14088 237 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 LIN9Q5TKA1 542 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 ASTLQ6HA08 431 aaPredicted RBP15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 MPZL3Q6UWV2 235 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 CD300LGQ6UXG3 332 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 AK8Q96MA6 479 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 PNMA5Q96PV4 448 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 MYADMQ96S97 322 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 TARS2Q9BW92 718 aaKnown RBP15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 SMC3Q9UQE7 1217 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 BACE2Q9Y5Z0 518 aa15.75■□□□□ 0.11
SNRNP40-203ENST00000463988 ZFP37Q9Y6Q3 630 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms