RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ADGRA2Q96PE1 1338 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 CACNA1FO60840 1977 aa4.43□□□□□ -1.7
SCFD1-204ENST00000463622 PDPK1O15530 556 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 MAFKO60675 156 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 ALDH1L1O75891 902 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 DDX58O95786 925 aaKnown RBP4.42□□□□□ -1.7
SCFD1-204ENST00000463622 ITGB3P05106 788 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 CKMP06732 381 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 INSRRP14616 1297 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 GTF2F1P35269 517 aaKnown RBP eCLIP4.42□□□□□ -1.7
SCFD1-204ENST00000463622 GPR85P60893 370 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 UBXN2AP68543 259 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 MOGSQ13724 837 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 TNFAIP1Q13829 316 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 KIZQ2M2Z5 673 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 MTERF2Q49AM1 385 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 PAN2Q504Q3 1202 aaKnown RBP4.42□□□□□ -1.7
SCFD1-204ENST00000463622 ANKRD23Q86SG2 305 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 FAM124AQ86V42 546 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 LGI4Q8N135 537 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 RAET1EQ8TD07 263 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 CD244Q9BZW8 370 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 TMEM168Q9H0V1 697 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 VEZTQ9HBM0 779 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 DDX19BQ9UMR2 479 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 PA2G4Q9UQ80 394 aaKnown RBP4.42□□□□□ -1.7
SCFD1-204ENST00000463622 FAM205AQ6ZU69 1335 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 LAMB2P55268 1798 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 SNAP23O00161 211 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 ADCY3O60266 1144 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 TFRCP02786 760 aaKnown RBP4.42□□□□□ -1.7
SCFD1-204ENST00000463622 ATP2B1P20020 1258 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 IGHMBP2P38935 993 aaKnown RBP4.42□□□□□ -1.7
SCFD1-204ENST00000463622 RFX5P48382 616 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-204ENST00000463622 PPATQ06203 517 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 CHRNDQ07001 517 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 SSRP1Q08945 709 aaKnown RBP4.42□□□□□ -1.7
SCFD1-204ENST00000463622 PPIL2Q13356 520 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 LOXL4Q96JB6 756 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 CDC6Q99741 560 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 MRIQ9BWK5 157 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 TMEM39BQ9GZU3 492 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 TDRD3Q9H7E2 651 aaKnown RBP4.42□□□□□ -1.7
SCFD1-204ENST00000463622 CPA4Q9UI42 421 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 DSEQ9UL01 958 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 MSRB2Q9Y3D2 182 aa4.42□□□□□ -1.7
SCFD1-204ENST00000463622 TCRBV5S4A2TA0A5A2 114 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 ACOT7O00154 380 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 PLATP00750 562 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 UBTFL1P0CB47 393 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-204ENST00000463622 PRKCZQ05513 592 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 SPIRE1Q08AE8 756 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 NEXNQ0ZGT2 675 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 RABL6Q3YEC7 729 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-204ENST00000463622 FKBP1CQ5VVH2 108 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 VASNQ6EMK4 673 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 BORAQ6PGQ7 559 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 NECAB2Q7Z6G3 386 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 TRIM48Q8IWZ4 208 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 TDHQ8IZJ6 230 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 NUDT10Q8NFP7 164 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 TDRD7Q8NHU6 1098 aaKnown RBP4.41□□□□□ -1.7
SCFD1-204ENST00000463622 UHMK1Q8TAS1 419 aaKnown RBP4.41□□□□□ -1.7
SCFD1-204ENST00000463622 SH3RF2Q8TEC5 729 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 ZKSCAN4Q969J2 545 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-204ENST00000463622 MBD6Q96DN6 1003 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 NUDT11Q96G61 164 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 PAWRQ96IZ0 340 aaKnown RBP4.41□□□□□ -1.7
SCFD1-204ENST00000463622 C8orf49Q96NF6 230 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 GUCD1Q96NT3 240 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 DEFB118Q96PH6 123 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 TMEM209Q96SK2 561 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 PUS3Q9BZE2 481 aaKnown RBP4.41□□□□□ -1.7
SCFD1-204ENST00000463622 SMPD4Q9NXE4 827 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 C9orf78Q9NZ63 289 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-204ENST00000463622 ZNF112Q9UJU3 913 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 GABRQQ9UN88 632 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 PCDHA8Q9Y5H6 950 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 MYPNQ86TC9 1320 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 VCANP13611 3396 aa4.41□□□□□ -1.7
SCFD1-204ENST00000463622 FAM47E-STBD1D6RA91 191 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 PDHXO00330 501 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 B4GALT4O60513 344 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 GNAI2P04899 355 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 FAM153BP0C7A2 387 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 SRGAP2CP0DJJ0 459 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 COL6A1P12109 1028 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 FAHP16930 419 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 MAGEA10P43363 369 aaPredicted RBP4.4□□□□□ -1.7
SCFD1-204ENST00000463622 FLT3LGP49771 235 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 PFKPQ01813 784 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 SKIDA1Q1XH10 827 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 LMBR1LQ6UX01 489 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.4□□□□□ -1.7
SCFD1-204ENST00000463622 FAM83AQ86UY5 434 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 IGDCC4Q8TDY8 1250 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 MPHOSPH8Q99549 860 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 FTSJ1Q9UET6 329 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 ST6GALNAC2Q9UJ37 374 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 RPTORQ8N122 1335 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms