RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 VTI1AQ96AJ9 217 aa20.56■□□□□ 0.88
CCDC78-206ENST00000463539 FAM84AQ96KN4 292 aa20.56■□□□□ 0.88
CCDC78-206ENST00000463539 MOXD2PA6NHM9 499 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 SERPING1P05155 500 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 PLEKP08567 350 aaPredicted RBP20.55■□□□□ 0.88
CCDC78-206ENST00000463539 ARID5AQ03989 594 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 ENOX2Q16206 610 aaKnown RBP20.55■□□□□ 0.88
CCDC78-206ENST00000463539 KYAT1Q16773 422 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 TDRD12Q587J7 1177 aaKnown RBP20.55■□□□□ 0.88
CCDC78-206ENST00000463539 APBB1IPQ7Z5R6 666 aaPredicted RBP20.55■□□□□ 0.88
CCDC78-206ENST00000463539 SERINC5Q86VE9 423 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 SH3TC2Q8TF17 1288 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 TMEM40Q8WWA1 233 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 FAM212AQ96EL1 285 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 DEF6Q9H4E7 631 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 GRIN2DO15399 1336 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 F8VZ95 297 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 M0QZ92 97 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 LRRN2O75325 713 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 C4BPAP04003 597 aaKnown RBP20.55■□□□□ 0.88
CCDC78-206ENST00000463539 RPLP2P05387 115 aaKnown RBP20.55■□□□□ 0.88
CCDC78-206ENST00000463539 CLTAP09496 248 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 STAG3L1P0CL83 205 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 AP3M2P53677 418 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 TDRD10Q5VZ19 366 aaKnown RBP20.55■□□□□ 0.88
CCDC78-206ENST00000463539 HGSNATQ68CP4 663 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 ACRBPQ8NEB7 543 aa20.55■□□□□ 0.88
CCDC78-206ENST00000463539 C16orf45Q96MC5 204 aaPredicted RBP20.55■□□□□ 0.88
CCDC78-206ENST00000463539 RPF1Q9H9Y2 349 aaKnown RBP20.55■□□□□ 0.88
CCDC78-206ENST00000463539 UBE2TQ9NPD8 197 aaPredicted RBP20.55■□□□□ 0.88
CCDC78-206ENST00000463539 GOLGA6L9A6NEM1 432 aa20.54■□□□□ 0.88
CCDC78-206ENST00000463539 IPO7O95373 1038 aaKnown RBP20.54■□□□□ 0.88
CCDC78-206ENST00000463539 CXCL8P10145 99 aa20.54■□□□□ 0.88
CCDC78-206ENST00000463539 HOXA11P31270 313 aaPredicted RBP20.54■□□□□ 0.88
CCDC78-206ENST00000463539 EIF4A3P38919 411 aaKnown RBP20.54■□□□□ 0.88
CCDC78-206ENST00000463539 STAT1P42224 750 aa20.54■□□□□ 0.88
CCDC78-206ENST00000463539 MRPS6P82932 125 aaKnown RBP20.54■□□□□ 0.88
CCDC78-206ENST00000463539 DCAF4L1Q3SXM0 396 aa20.54■□□□□ 0.88
CCDC78-206ENST00000463539 NOTUMQ6P988 496 aa20.54■□□□□ 0.88
CCDC78-206ENST00000463539 FMNL3Q8IVF7 1028 aa20.54■□□□□ 0.88
CCDC78-206ENST00000463539 ARHGEF19Q8IW93 802 aa20.54■□□□□ 0.88
CCDC78-206ENST00000463539 GLT1D1Q96MS3 346 aa20.54■□□□□ 0.88
CCDC78-206ENST00000463539 TSEN34Q9BSV6 310 aaKnown RBP20.54■□□□□ 0.88
CCDC78-206ENST00000463539 CELF4Q9BZC1 486 aaKnown RBP20.54■□□□□ 0.88
CCDC78-206ENST00000463539 SSU72P8A0A1W2PR75 194 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 ZC3H11AO75152 810 aaKnown RBP eCLIP20.53■□□□□ 0.88
CCDC78-206ENST00000463539 IL18RAPO95256 599 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 PIK3CAP42336 1068 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 KLHL30Q0D2K2 578 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 ITGA7Q13683 1181 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 DRAP1Q14919 205 aaPredicted RBP20.53■□□□□ 0.88
CCDC78-206ENST00000463539 PTGISQ16647 500 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 SLC27A1Q6PCB7 646 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 TMEM192Q8IY95 271 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 OR5B17Q8NGF7 314 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 NT5C1BQ96P26 610 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.53■□□□□ 0.88
CCDC78-206ENST00000463539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.53■□□□□ 0.884e-20■■■■■ 173.9
CCDC78-206ENST00000463539 WBP1LQ9NX94 342 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 PTPN22Q9Y2R2 807 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 EIF3CLB5ME19 914 aaKnown RBP20.53■□□□□ 0.88
CCDC78-206ENST00000463539 HLA-DRAP01903 254 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 AXLP30530 894 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 SOX5P35711 763 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 POU5F1Q01860 360 aaKnown RBP20.53■□□□□ 0.88
CCDC78-206ENST00000463539 MAPK8IP2Q13387 824 aaPredicted RBP20.53■□□□□ 0.88
CCDC78-206ENST00000463539 ARHGAP44Q17R89 818 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 DNTTIP2Q5QJE6 756 aaKnown RBP20.53■□□□□ 0.88
CCDC78-206ENST00000463539 REXO1L1PQ8IX06 675 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 PPM1KQ8N3J5 372 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 ARRDC4Q8NCT1 418 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 EIF3CQ99613 913 aaKnown RBP20.53■□□□□ 0.88
CCDC78-206ENST00000463539 TRPV2Q9Y5S1 764 aa20.53■□□□□ 0.88
CCDC78-206ENST00000463539 BZW2Q9Y6E2 419 aaKnown RBP20.53■□□□□ 0.88
CCDC78-206ENST00000463539 AKR1B10O60218 316 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 B4GALT4O60513 344 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 PHACTR2O75167 634 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 PNMA6AP0CW24 399 aaPredicted RBP20.52■□□□□ 0.88
CCDC78-206ENST00000463539 FERP16591 822 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 KIF11P52732 1056 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 KRT83P78385 493 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 PTPN11Q06124 597 aaPredicted RBP20.52■□□□□ 0.88
CCDC78-206ENST00000463539 PTPN14Q15678 1187 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 DUOXA2Q1HG44 320 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 IRF2BP2Q7Z5L9 587 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 RPAINQ86UA6 219 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 WNT8BQ93098 351 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 MTMR12Q9C0I1 747 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 GPR88Q9GZN0 384 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 C1orf112Q9NSG2 853 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 PIN4Q9Y237 131 aaKnown RBP20.52■□□□□ 0.88
CCDC78-206ENST00000463539 NOD1Q9Y239 953 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 CDY2AQ9Y6F7 541 aa20.52■□□□□ 0.88
CCDC78-206ENST00000463539 NPTXRO95502 500 aa20.51■□□□□ 0.87
CCDC78-206ENST00000463539 TFAMQ00059 246 aaKnown RBP20.51■□□□□ 0.87
CCDC78-206ENST00000463539 WDR44Q5JSH3 913 aa20.51■□□□□ 0.87
CCDC78-206ENST00000463539 NYAP1Q6ZVC0 841 aa20.51■□□□□ 0.87
CCDC78-206ENST00000463539 GFPT2O94808 682 aa20.5■□□□□ 0.87
CCDC78-206ENST00000463539 VNN1O95497 513 aa20.5■□□□□ 0.87
CCDC78-206ENST00000463539 CTSHP09668 335 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms