RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 ADPGKQ9BRR6 497 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 POLR3CQ9BUI4 534 aaPredicted RBP16.9■□□□□ 0.3
CMSS1-202ENST00000463526 KIFC3Q9BVG8 833 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 SIT1Q9Y3P8 196 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 MYO15AQ9UKN7 3530 aa16.9■□□□□ 0.3
CMSS1-202ENST00000463526 ZMYM2Q9UBW7 1377 aa16.89■□□□□ 0.3
CMSS1-202ENST00000463526 ACKR2O00590 384 aa16.89■□□□□ 0.29
CMSS1-202ENST00000463526 PAPLNO95428 1278 aa16.89■□□□□ 0.29
CMSS1-202ENST00000463526 CYP11B2P19099 503 aa16.89■□□□□ 0.29
CMSS1-202ENST00000463526 GPC5P78333 572 aa16.89■□□□□ 0.29
CMSS1-202ENST00000463526 ST3GAL1Q11201 340 aa16.89■□□□□ 0.29
CMSS1-202ENST00000463526 ERMNQ8TAM6 284 aa16.89■□□□□ 0.29
CMSS1-202ENST00000463526 FGF14Q92915 247 aa16.89■□□□□ 0.29
CMSS1-202ENST00000463526 FOXQ1Q9C009 403 aa16.89■□□□□ 0.29
CMSS1-202ENST00000463526 CDH7Q9ULB5 785 aa16.89■□□□□ 0.29
CMSS1-202ENST00000463526 SPTBN4Q9H254 2564 aa16.89■□□□□ 0.29
CMSS1-202ENST00000463526 DOCK8Q8NF50 2099 aa16.89■□□□□ 0.29
CMSS1-202ENST00000463526 LRRN2O75325 713 aa16.88■□□□□ 0.29
CMSS1-202ENST00000463526 HNRNPA1P09651 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
CMSS1-202ENST00000463526 OR52Z1P0C646 297 aa16.88■□□□□ 0.29
CMSS1-202ENST00000463526 OR1D2P34982 312 aa16.88■□□□□ 0.29
CMSS1-202ENST00000463526 ELAVL2Q12926 359 aaKnown RBP16.88■□□□□ 0.29
CMSS1-202ENST00000463526 NAB2Q15742 525 aa16.88■□□□□ 0.29
CMSS1-202ENST00000463526 AXDND1Q5T1B0 1012 aaPredicted RBP16.88■□□□□ 0.29
CMSS1-202ENST00000463526 ITFG1Q8TB96 612 aa16.88■□□□□ 0.29
CMSS1-202ENST00000463526 SLC7A14Q8TBB6 771 aa16.88■□□□□ 0.29
CMSS1-202ENST00000463526 CCDC113Q9H0I3 377 aa16.88■□□□□ 0.29
CMSS1-202ENST00000463526 HCFC1R1Q9NWW0 138 aa16.88■□□□□ 0.29
CMSS1-202ENST00000463526 VPS13AQ96RL7 3174 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 DOCK6Q96HP0 2047 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 I3L4J1 428 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 XYLBO75191 536 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 B3GAT3O94766 335 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 RPA1P27694 616 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 CCT6AP40227 531 aaKnown RBP16.87■□□□□ 0.29
CMSS1-202ENST00000463526 NAMPTP43490 491 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 ID4P47928 161 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 SNW1Q13573 536 aaKnown RBP16.87■□□□□ 0.29
CMSS1-202ENST00000463526 PPP2R5AQ15172 486 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 NT5DC1Q5TFE4 455 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 PHLDB3Q6NSJ2 640 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 FGF13Q92913 245 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 C8orf76Q96K31 380 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 IFT74Q96LB3 600 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 SLC2A4RGQ9NR83 387 aa16.87■□□□□ 0.29
CMSS1-202ENST00000463526 ZFP37Q9Y6Q3 630 aaPredicted RBP16.87■□□□□ 0.29
CMSS1-202ENST00000463526 LMNAP02545 664 aaKnown RBP16.86■□□□□ 0.29
CMSS1-202ENST00000463526 NEFLP07196 543 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 CLCNKBP51801 687 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 OSTNP61366 133 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 ECM1Q16610 540 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 DCAF4L1Q3SXM0 396 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 ATF7IP2Q5U623 682 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 PDXDC1Q6P996 788 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 RSPO2Q6UXX9 243 aaPredicted RBP16.86■□□□□ 0.29
CMSS1-202ENST00000463526 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.86■□□□□ 0.29
CMSS1-202ENST00000463526 CCDC83Q8IWF9 413 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 ING5Q8WYH8 240 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 KXD1Q9BQD3 176 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 BHMT2Q9H2M3 363 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 GOLGA2P5Q9HBQ8 144 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 CDY1Q9Y6F8 540 aa16.86■□□□□ 0.29
CMSS1-202ENST00000463526 MTCL1Q9Y4B5 1905 aaKnown RBP16.86■□□□□ 0.29
CMSS1-202ENST00000463526 EP300Q09472 2414 aaPredicted RBP16.86■□□□□ 0.29
CMSS1-202ENST00000463526 GVINP1Q7Z2Y8 2422 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 SP9P0CG40 484 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 GLULP15104 373 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 FGFR3P22607 806 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 TKTP29401 623 aaKnown RBP16.85■□□□□ 0.29
CMSS1-202ENST00000463526 BRCC3P46736 316 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 GNL2Q13823 731 aaKnown RBP16.85■□□□□ 0.29
CMSS1-202ENST00000463526 RAB33AQ14088 237 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 NBR1Q14596 966 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 TTC38Q5R3I4 469 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 C1orf210Q8IVY1 113 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 SHDQ96IW2 340 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 HINFPQ9BQA5 517 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 DLGAP2Q9P1A6 1054 aa16.85■□□□□ 0.29
CMSS1-202ENST00000463526 DNMT3BQ9UBC3 853 aaKnown RBP16.85■□□□□ 0.29
CMSS1-202ENST00000463526 DMDP11532 3685 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 CCDC169A6NNP5 214 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 K7ERI5 159 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 EFNA5P52803 228 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 STARD6P59095 220 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 FOXK2Q01167 660 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 UBXN2BQ14CS0 331 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 PABPC1LQ4VXU2 614 aaKnown RBP16.84■□□□□ 0.29
CMSS1-202ENST00000463526 SLC44A4Q53GD3 710 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 HAUS3Q68CZ6 603 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 CD300LGQ6UXG3 332 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 MTSS1LQ765P7 747 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 CEP120Q8N960 986 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 PJA1Q8NG27 643 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 MCRS1Q96EZ8 462 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 PPP1R10Q96QC0 940 aaKnown RBP16.84■□□□□ 0.29
CMSS1-202ENST00000463526 MTRRQ9UBK8 725 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 LRWD1Q9UFC0 647 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 KIAA1024Q9UPX6 916 aa16.84■□□□□ 0.29
CMSS1-202ENST00000463526 MRPS23Q9Y3D9 190 aaKnown RBP16.84■□□□□ 0.29
CMSS1-202ENST00000463526 CD72P21854 359 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms