RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 HYAL1Q12794 435 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 TUSC3Q13454 348 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 KRBA2Q6ZNG9 492 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 ADGRD2Q7Z7M1 963 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 DDX53Q86TM3 631 aaKnown RBP19.33■□□□□ 0.68
VPS52-214ENST00000463486 RNF168Q8IYW5 571 aaPredicted RBP19.33■□□□□ 0.68
VPS52-214ENST00000463486 FMR1NBQ8N0W7 255 aaPredicted RBP19.33■□□□□ 0.68
VPS52-214ENST00000463486 BICD1Q96G01 975 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 ACAP3Q96P50 834 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 FAM193BQ96PV7 902 aaPredicted RBP19.33■□□□□ 0.68
VPS52-214ENST00000463486 ACCSQ96QU6 501 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 CCDC94Q9BW85 323 aaPredicted RBP19.33■□□□□ 0.68
VPS52-214ENST00000463486 CNTN3Q9P232 1028 aa19.33■□□□□ 0.68
VPS52-214ENST00000463486 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.32■□□□□ 0.68
VPS52-214ENST00000463486 TTC26A0AVF1 554 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 PRPF6O94906 941 aaKnown RBP19.32■□□□□ 0.68
VPS52-214ENST00000463486 THP07101 528 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 CLTAP09496 248 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 PRR29P0C7W0 189 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 OR1G1P47890 313 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 KRT17Q04695 432 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 SOX4Q06945 474 aaPredicted RBP19.32■□□□□ 0.68
VPS52-214ENST00000463486 ALCAMQ13740 583 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 TPRNQ4KMQ1 711 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 GLRA4Q5JXX5 417 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 CD300LGQ6UXG3 332 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 ZNF507Q8TCN5 953 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 RABGGTAQ92696 567 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 TMEM169Q96HH4 297 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 RPS6KC1Q96S38 1066 aa19.32■□□□□ 0.68
VPS52-214ENST00000463486 PUF60Q9UHX1 559 aaKnown RBP19.32■□□□□ 0.68
VPS52-214ENST00000463486 CPSF3Q9UKF6 684 aaKnown RBP19.32■□□□□ 0.68
VPS52-214ENST00000463486 PRG3Q9Y2Y8 225 aaPredicted RBP19.32■□□□□ 0.68
VPS52-214ENST00000463486 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.31■□□□□ 0.68
VPS52-214ENST00000463486 HIDE1A8MVS5 230 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 OGTO15294 1046 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 LILRB3O75022 631 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 CSPG5O95196 566 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 GTF2F1P35269 517 aaKnown RBP eCLIP19.31■□□□□ 0.68
VPS52-214ENST00000463486 ENOX2Q16206 610 aaKnown RBP19.31■□□□□ 0.68
VPS52-214ENST00000463486 CTC1Q2NKJ3 1217 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 FAM26FQ5R3K3 315 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 CRELD2Q6UXH1 353 aaPredicted RBP19.31■□□□□ 0.68
VPS52-214ENST00000463486 TAS1R1Q7RTX1 841 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 ZSWIM2Q8NEG5 633 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 SCFD1Q8WVM8 642 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 MSTO1Q9BUK6 570 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 ZBP1Q9H171 429 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 TSHZ2Q9NRE2 1034 aa19.31■□□□□ 0.68
VPS52-214ENST00000463486 TOPORSQ9NS56 1045 aaPredicted RBP19.31■□□□□ 0.68
VPS52-214ENST00000463486 GADD45BO75293 160 aaPredicted RBP19.3■□□□□ 0.68
VPS52-214ENST00000463486 MYL1P05976 194 aa19.3■□□□□ 0.68
VPS52-214ENST00000463486 CXCL8P10145 99 aa19.3■□□□□ 0.68
VPS52-214ENST00000463486 LTBRP36941 435 aa19.3■□□□□ 0.68
VPS52-214ENST00000463486 YARSP54577 528 aaKnown RBP19.3■□□□□ 0.68
VPS52-214ENST00000463486 DPYDQ12882 1025 aa19.3■□□□□ 0.68
VPS52-214ENST00000463486 ZBTB6Q15916 424 aa19.3■□□□□ 0.68
VPS52-214ENST00000463486 SLFN12LQ6IEE8 588 aa19.3■□□□□ 0.68
VPS52-214ENST00000463486 PDE12Q6L8Q7 609 aaKnown RBP19.3■□□□□ 0.68
VPS52-214ENST00000463486 VPS52Q8N1B4 723 aa19.3■□□□□ 0.68
VPS52-214ENST00000463486 MRPL43Q8N983 215 aaKnown RBP19.3■□□□□ 0.68
VPS52-214ENST00000463486 TMEM87AQ8NBN3 555 aa19.3■□□□□ 0.68
VPS52-214ENST00000463486 TCF25Q9BQ70 676 aa19.3■□□□□ 0.68
VPS52-214ENST00000463486 PLEKHA5Q9HAU0 1116 aa19.3■□□□□ 0.68
VPS52-214ENST00000463486 NGRNQ9NPE2 291 aaKnown RBP19.3■□□□□ 0.68
VPS52-214ENST00000463486 IRAK3Q9Y616 596 aa19.3■□□□□ 0.68
VPS52-214ENST00000463486 TTC28Q96AY4 2481 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 C2orf71A6NGG8 1288 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 CASTOR2A6NHX0 329 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 EIF3DO15371 548 aaKnown RBP eCLIP19.29■□□□□ 0.68
VPS52-214ENST00000463486 TGFB1I1O43294 461 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 STK4Q13043 487 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 KCNC3Q14003 757 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 KYAT1Q16773 422 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 BMT2Q1RMZ1 405 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 KMT5BQ4FZB7 885 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 TMEM130Q8N3G9 435 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 C18orf25Q96B23 403 aaPredicted RBP19.29■□□□□ 0.68
VPS52-214ENST00000463486 GPR62Q9BZJ7 368 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 TMEM206Q9H813 350 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 GOLGA2P5Q9HBQ8 144 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 EXOC7Q9UPT5 735 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 CITO14578 2027 aa19.29■□□□□ 0.68
VPS52-214ENST00000463486 LACTBL1A8MY62 500 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 LINC01565O15544 149 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 KIF4AO95239 1232 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 CTSAP10619 480 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 GARTP22102 1010 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 MATR3P43243 847 aaKnown RBP eCLIP19.28■□□□□ 0.68
VPS52-214ENST00000463486 ACOT2P49753 483 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 FAM160A1Q05DH4 1040 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 ADAM15Q13444 863 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 HSP90AA2PQ14568 343 aaPredicted RBP19.28■□□□□ 0.68
VPS52-214ENST00000463486 UPP1Q16831 310 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 PLPP4Q5VZY2 271 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 TMC7Q7Z402 723 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.28■□□□□ 0.68
VPS52-214ENST00000463486 KIAA0895Q8NCT3 520 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 VN1R2Q8NFZ6 395 aa19.28■□□□□ 0.68
VPS52-214ENST00000463486 MICAL1Q8TDZ2 1067 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms