RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RGL1Q9NZL6 768 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 NENFQ9UMX5 172 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 SZT2Q5T011 3432 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 GRID2IPA4D2P6 1211 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 CLSTN1O94985 981 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 ACRP10323 421 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 PON1P27169 355 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 TNFRSF8P28908 595 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 PSMC2P35998 433 aaKnown RBP10.73□□□□□ -0.69
PTPRD-207ENST00000463477 AARSP49588 968 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTPRD-207ENST00000463477 JAM2P57087 298 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 RAPGEF1Q13905 1077 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 GPNMBQ14956 572 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 PPP2R5AQ15172 486 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 GRIK4Q16099 956 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 GLE1Q53GS7 698 aaKnown RBP10.73□□□□□ -0.69
PTPRD-207ENST00000463477 ZNF618Q5T7W0 954 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 RASIP1Q5U651 963 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 TAF2Q6P1X5 1199 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 TRAF7Q6Q0C0 670 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 ZNF720Q7Z2F6 126 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 ATP8B4Q8TF62 1192 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 BBXQ8WY36 941 aaPredicted RBP10.73□□□□□ -0.69
PTPRD-207ENST00000463477 HERVK_113Q902F9 699 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 WNT8BQ93098 351 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 STRA6Q9BX79 667 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 TLR10Q9BXR5 811 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 UNC45AQ9H3U1 944 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 MED4Q9NPJ6 270 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 DMAC2Q9NW81 257 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 INTUQ9ULD6 942 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 SAMM50Q9Y512 469 aa10.73□□□□□ -0.69
PTPRD-207ENST00000463477 TRIP12Q14669 1992 aaPredicted RBP10.72□□□□□ -0.69
PTPRD-207ENST00000463477 ARID2Q68CP9 1835 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 LAMA2P24043 3122 aaKnown RBP10.72□□□□□ -0.69
PTPRD-207ENST00000463477 PPP1R37O75864 691 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 LYPLA2O95372 231 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 RPLP2P05387 115 aaKnown RBP10.72□□□□□ -0.69
PTPRD-207ENST00000463477 PAFAH1B1P43034 410 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 MCCD1P59942 119 aaPredicted RBP10.72□□□□□ -0.69
PTPRD-207ENST00000463477 CTTNQ14247 550 aaKnown RBP10.72□□□□□ -0.69
PTPRD-207ENST00000463477 IFI16Q16666 785 aaKnown RBP10.72□□□□□ -0.69
PTPRD-207ENST00000463477 GPR153Q6NV75 609 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 LRRC8DQ7L1W4 858 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 ZNF771Q7L3S4 317 aaPredicted RBP10.72□□□□□ -0.69
PTPRD-207ENST00000463477 TPH2Q8IWU9 490 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 EXOC4Q96A65 974 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 CAPZA3Q96KX2 299 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 CRACR2AQ9BSW2 395 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 TIPINQ9BVW5 301 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 SIX2Q9NPC8 291 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 GABBR1Q9UBS5 961 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 SALL4Q9UJQ4 1053 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 DBR1Q9UK59 544 aaKnown RBP10.72□□□□□ -0.69
PTPRD-207ENST00000463477 TRPC6Q9Y210 931 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 KAT6AQ92794 2004 aa10.72□□□□□ -0.69
PTPRD-207ENST00000463477 A0A087X0T9 212 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 A0A0A6YYK5 440 aaPredicted RBP10.71□□□□□ -0.69
PTPRD-207ENST00000463477 CXCL10P02778 98 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 FAM228BP0C875 321 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 FERP16591 822 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 SLC9A1P19634 815 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 RFX1P22670 979 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 THPOP40225 353 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 SNRPFP62306 86 aaKnown RBP10.71□□□□□ -0.69
PTPRD-207ENST00000463477 ZNF484Q5JVG2 852 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 FAM26DQ5JW98 314 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 CCNI2Q6ZMN8 369 aaPredicted RBP10.71□□□□□ -0.69
PTPRD-207ENST00000463477 HS2ST1Q7LGA3 356 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 MIER3Q7Z3K6 550 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 DEFB128Q7Z7B8 93 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 C12orf56Q8IXR9 622 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 FAM186BQ8IYM0 893 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 MYCT1Q8N699 235 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 SPATA4Q8NEY3 305 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 FAM71BQ8TC56 605 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 PIGOQ8TEQ8 1089 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 RNPC3Q96LT9 517 aaKnown RBP10.71□□□□□ -0.69
PTPRD-207ENST00000463477 SPAG5Q96R06 1193 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 NRBP2Q9NSY0 501 aa10.71□□□□□ -0.69
PTPRD-207ENST00000463477 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.71□□□□□ -0.69
PTPRD-207ENST00000463477 IGSF9BQ9UPX0 1349 aa10.71□□□□□ -0.7
PTPRD-207ENST00000463477 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.7□□□□□ -0.7
PTPRD-207ENST00000463477 SMIM35A0A1B0GVV1 85 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.7□□□□□ -0.7
PTPRD-207ENST00000463477 SOX1O00570 391 aaPredicted RBP10.7□□□□□ -0.7
PTPRD-207ENST00000463477 ZNF185O15231 689 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 MAPK13O15264 365 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 CHMP2AO43633 222 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 ZNF862O60290 1169 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 NBNO60934 754 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 KLRC1P26715 233 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 CASP4P49662 377 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 PTK2Q05397 1052 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 CFAP221Q4G0U5 840 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 MEI1Q5TIA1 1274 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 OTOP2Q7RTS6 562 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 RSPH3Q86UC2 560 aa10.7□□□□□ -0.7
PTPRD-207ENST00000463477 VPS36Q86VN1 386 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms