RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ATMINO43313 823 aaPredicted RBP13.8□□□□□ -0.2
VAPB-203ENST00000463370 HBP1O60381 514 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 KIF4AO95239 1232 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 TUBB4BP68371 445 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 ENPEPQ07075 957 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 LAMC2Q13753 1193 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 GRB14Q14449 540 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 MXD4Q14582 209 aaPredicted RBP13.8□□□□□ -0.2
VAPB-203ENST00000463370 CCDC181Q5TID7 509 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 ZPBP2Q6X784 338 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 DAAM2Q86T65 1068 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 DPP9Q86TI2 863 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 ABRAQ8N0Z2 381 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 NPLOC4Q8TAT6 608 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 TCP11Q8WWU5 503 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 CTNNBL1Q8WYA6 563 aaPredicted RBP13.8□□□□□ -0.2
VAPB-203ENST00000463370 DDX1Q92499 740 aaKnown RBP13.8□□□□□ -0.2
VAPB-203ENST00000463370 MAML3Q96JK9 1138 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 TCHPQ9BT92 498 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 LRRC1Q9BTT6 524 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 FUT8Q9BYC5 575 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 MRPL4Q9BYD3 311 aaKnown RBP13.8□□□□□ -0.2
VAPB-203ENST00000463370 ISCUQ9H1K1 167 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 VTA1Q9NP79 307 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 NMRK2Q9NPI5 230 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 ERAP1Q9NZ08 941 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 PPME1Q9Y570 386 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 RBM47A0AV96 593 aaKnown RBP13.8□□□□□ -0.2
VAPB-203ENST00000463370 STRNO43815 780 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 TOM1L1O75674 476 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 GH1P01241 217 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 SMPD1P17405 629 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 SCP2P22307 547 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 PIK3CAP42336 1068 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 SLC26A2P50443 739 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 EFNA5P52803 228 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 GCNT1Q02742 428 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 RPS6KA1Q15418 735 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 GSPT2Q8IYD1 628 aaKnown RBP13.8□□□□□ -0.2
VAPB-203ENST00000463370 ST7Q9NRC1 585 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 CPA4Q9UI42 421 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 STXBP5LQ9Y2K9 1186 aa13.8□□□□□ -0.2
VAPB-203ENST00000463370 SIP14410 1827 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 ZNFX1Q9P2E3 1918 aaKnown RBP13.79□□□□□ -0.2
VAPB-203ENST00000463370 ANKRD62A6NC57 917 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 KIAA0391O15091 583 aaKnown RBP13.79□□□□□ -0.2
VAPB-203ENST00000463370 MYBL2P10244 700 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 KRT5P13647 590 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 PLA2G4AP47712 749 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 MAPK6Q16659 721 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 IFI16Q16666 785 aaKnown RBP13.79□□□□□ -0.2
VAPB-203ENST00000463370 WDR93Q6P2C0 686 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 NT5DC3Q86UY8 548 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 TMEM130Q8N3G9 435 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 MMGT1Q8N4V1 131 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 CEP120Q8N960 986 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 PPTC7Q8NI37 304 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 VTI1AQ96AJ9 217 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 PARK7Q99497 189 aaKnown RBP13.79□□□□□ -0.2
VAPB-203ENST00000463370 CGRRF1Q99675 332 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 C16orf70Q9BSU1 422 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 DMGDHQ9UI17 866 aaKnown RBP13.79□□□□□ -0.2
VAPB-203ENST00000463370 BRCA2P51587 3418 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 INO80B-WBP1J3KQ70 363 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 GAS2O43903 313 aaKnown RBP13.79□□□□□ -0.2
VAPB-203ENST00000463370 LDHAP00338 332 aaKnown RBP13.79□□□□□ -0.2
VAPB-203ENST00000463370 SLC7A5Q01650 507 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 MBTD1Q05BQ5 628 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 KCTD19Q17RG1 926 aaPredicted RBP13.79□□□□□ -0.2
VAPB-203ENST00000463370 FAM110CQ1W6H9 321 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 CFAP221Q4G0U5 840 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 EEF1DP3Q658K8 133 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 PEX26Q7Z412 305 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 ZBTB8OSQ8IWT0 167 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 PPP1R13LQ8WUF5 828 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 HNRNPLLQ8WVV9 542 aaKnown RBP13.79□□□□□ -0.2
VAPB-203ENST00000463370 FAM212AQ96EL1 285 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 INO80BQ9C086 356 aaPredicted RBP13.79□□□□□ -0.2
VAPB-203ENST00000463370 IFT122Q9HBG6 1241 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 C1orf112Q9NSG2 853 aa13.79□□□□□ -0.2
VAPB-203ENST00000463370 IGF2BP3O00425 579 aaKnown RBP eCLIP13.78□□□□□ -0.2
VAPB-203ENST00000463370 CST3P01034 146 aaPredicted RBP13.78□□□□□ -0.2
VAPB-203ENST00000463370 PAFAH1B1P43034 410 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 HUNKP57058 714 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 OSTNP61366 133 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 CDR2Q01850 454 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 ITIH3Q06033 890 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 PLEKHH3Q7Z736 793 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 ZNF467Q7Z7K2 595 aaPredicted RBP13.78□□□□□ -0.2
VAPB-203ENST00000463370 BRSK2Q8IWQ3 736 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 TMEM192Q8IY95 271 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 FZD8Q9H461 694 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 PLEKHA4Q9H4M7 779 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 PTPRHQ9HD43 1115 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 NUB1Q9Y5A7 615 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 DNAH12Q6ZR08 3092 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 ZC3H11AO75152 810 aaKnown RBP eCLIP13.78□□□□□ -0.2
VAPB-203ENST00000463370 ACO1P21399 889 aaKnown RBP13.78□□□□□ -0.2
VAPB-203ENST00000463370 PROZP22891 400 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 PDE6CP51160 858 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms