RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 CCL15Q16663 113 aa10.95□□□□□ -0.66
MSH5-211ENST00000463144 SPOPLQ6IQ16 392 aa10.95□□□□□ -0.66
MSH5-211ENST00000463144 SYCE1Q8N0S2 351 aa10.95□□□□□ -0.66
MSH5-211ENST00000463144 RNF149Q8NC42 400 aa10.95□□□□□ -0.66
MSH5-211ENST00000463144 OR5B17Q8NGF7 314 aa10.95□□□□□ -0.66
MSH5-211ENST00000463144 SCFD2Q8WU76 684 aa10.95□□□□□ -0.66
MSH5-211ENST00000463144 TCP11Q8WWU5 503 aa10.95□□□□□ -0.66
MSH5-211ENST00000463144 TAF4BQ92750 862 aa10.95□□□□□ -0.66
MSH5-211ENST00000463144 ZNF668Q96K58 619 aaPredicted RBP10.95□□□□□ -0.66
MSH5-211ENST00000463144 PBKQ96KB5 322 aa10.95□□□□□ -0.66
MSH5-211ENST00000463144 ACO2Q99798 780 aaKnown RBP10.95□□□□□ -0.66
MSH5-211ENST00000463144 KATNBL1Q9H079 304 aa10.95□□□□□ -0.66
MSH5-211ENST00000463144 DDX3YO15523 660 aaKnown RBP10.94□□□□□ -0.66
MSH5-211ENST00000463144 CEP104O60308 925 aa10.94□□□□□ -0.66
MSH5-211ENST00000463144 HARSP12081 509 aaKnown RBP10.94□□□□□ -0.66
MSH5-211ENST00000463144 GZMAP12544 262 aa10.94□□□□□ -0.66
MSH5-211ENST00000463144 GTF2A2P52657 109 aa10.94□□□□□ -0.66
MSH5-211ENST00000463144 EFNA5P52803 228 aa10.94□□□□□ -0.66
MSH5-211ENST00000463144 HADHBP55084 474 aaKnown RBP10.94□□□□□ -0.66
MSH5-211ENST00000463144 SMC1AQ14683 1233 aaKnown RBP10.94□□□□□ -0.66
MSH5-211ENST00000463144 TCEAL1Q15170 157 aa10.94□□□□□ -0.66
MSH5-211ENST00000463144 ZBTB33Q86T24 672 aa10.94□□□□□ -0.66
MSH5-211ENST00000463144 GTF3C2Q8WUA4 911 aaPredicted RBP10.94□□□□□ -0.66
MSH5-211ENST00000463144 ZBTB9Q96C00 473 aa10.94□□□□□ -0.66
MSH5-211ENST00000463144 APOBEC3GQ9HC16 384 aaKnown RBP10.94□□□□□ -0.66
MSH5-211ENST00000463144 MORF4L1Q9UBU8 362 aa10.94□□□□□ -0.66
MSH5-211ENST00000463144 AMFRQ9UKV5 643 aa10.94□□□□□ -0.66
MSH5-211ENST00000463144 SLC45A1Q9Y2W3 748 aa10.94□□□□□ -0.66
MSH5-211ENST00000463144 EVPLQ92817 2033 aa10.94□□□□□ -0.66
MSH5-211ENST00000463144 CLDN3O15551 220 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 GAS2O43903 313 aaKnown RBP10.93□□□□□ -0.66
MSH5-211ENST00000463144 TOM1L1O75674 476 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 MCM3P25205 808 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 SLC26A2P50443 739 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 GPC5P78333 572 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 CCNA1P78396 465 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 MXD4Q14582 209 aaPredicted RBP10.93□□□□□ -0.66
MSH5-211ENST00000463144 RHPN2Q8IUC4 686 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 RASGEF1CQ8N431 466 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 ACTRT1Q8TDG2 376 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 CGRRF1Q99675 332 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 PTPN18Q99952 460 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 TRPC6Q9Y210 931 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 RBM47A0AV96 593 aaKnown RBP10.93□□□□□ -0.66
MSH5-211ENST00000463144 H3BQF6 201 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 HBP1O60381 514 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 SNAI1O95863 264 aaPredicted RBP10.93□□□□□ -0.66
MSH5-211ENST00000463144 PRKCBP05771 671 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 GLI1P08151 1106 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 KRT5P13647 590 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 ACO1P21399 889 aaKnown RBP10.93□□□□□ -0.66
MSH5-211ENST00000463144 PIK3CAP42336 1068 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 CLCN3P51790 818 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 BIRC3Q13489 604 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 DCAF12L1Q5VU92 463 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 EFCAB12Q6NXP0 572 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 C8orf74Q6P047 294 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 ENOSF1Q7L5Y1 443 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 ANKRD23Q86SG2 305 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 RHOT2Q8IXI1 618 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 MRPL4Q9BYD3 311 aaKnown RBP10.93□□□□□ -0.66
MSH5-211ENST00000463144 MINDY3Q9H8M7 445 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 GBA2Q9HCG7 927 aaPredicted RBP10.93□□□□□ -0.66
MSH5-211ENST00000463144 ZCCHC17Q9NP64 241 aaKnown RBP10.93□□□□□ -0.66
MSH5-211ENST00000463144 PRDM10Q9NQV6 1147 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 C1orf112Q9NSG2 853 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 MGAMO43451 1857 aa10.93□□□□□ -0.66
MSH5-211ENST00000463144 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.92□□□□□ -0.66
MSH5-211ENST00000463144 ATMINO43313 823 aaPredicted RBP10.92□□□□□ -0.66
MSH5-211ENST00000463144 C22orf31O95567 290 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 CST3P01034 146 aaPredicted RBP10.92□□□□□ -0.66
MSH5-211ENST00000463144 IQCF3P0C7M6 154 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 ADCYAP1R1P41586 468 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 PDE6CP51160 858 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 GLE1Q53GS7 698 aaKnown RBP10.92□□□□□ -0.66
MSH5-211ENST00000463144 WDR44Q5JSH3 913 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 CCDC70Q6NSX1 233 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 BRSK2Q8IWQ3 736 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 EXOC8Q8IYI6 725 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 MSL3Q8N5Y2 521 aaKnown RBP10.92□□□□□ -0.66
MSH5-211ENST00000463144 AENQ8WTP8 325 aaKnown RBP10.92□□□□□ -0.66
MSH5-211ENST00000463144 GDAP1L1Q96MZ0 367 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 KRT12Q99456 494 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 SELENOOQ9BVL4 669 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 FZD8Q9H461 694 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 PTPRHQ9HD43 1115 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.92□□□□□ -0.66
MSH5-211ENST00000463144 STIM2Q9P246 746 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 CTTNBP2NLQ9P2B4 639 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 ALG6Q9Y672 507 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 UMODL1Q5DID0 1318 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 ZSCAN5CA6NGD5 496 aaPredicted RBP10.92□□□□□ -0.66
MSH5-211ENST00000463144 B4GALT5O43286 388 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 STRNO43815 780 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 LGALS2P05162 132 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 INSRRP14616 1297 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 PROZP22891 400 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 GCLCP48506 637 aaPredicted RBP10.92□□□□□ -0.66
MSH5-211ENST00000463144 MCL1Q07820 350 aa10.92□□□□□ -0.66
MSH5-211ENST00000463144 LAMC2Q13753 1193 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms