RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TOMM22Q9NS69 142 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 HOMER2Q9NSB8 354 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 SLC5A4Q9NY91 659 aa6.11□□□□□ -1.43
COPS3-204ENST00000462236 ZNF839A8K0R7 811 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 GOLGA6L22H0YM25 854 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 PAX4O43316 350 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 CYP7B1O75881 506 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 FARP2O94887 1054 aaPredicted RBP6.1□□□□□ -1.43
COPS3-204ENST00000462236 CHGBP05060 677 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 C8BP07358 591 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 ATF2P15336 505 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 SLC9A1P19634 815 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 MMP14P50281 582 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 MESP2Q0VG99 397 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 CRHR2Q13324 411 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 COPS6Q7L5N1 327 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 ARMC9Q7Z3E5 817 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 RASSF3Q86WH2 238 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 PROSER1Q86XN7 944 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 SLC17A8Q8NDX2 589 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 ASB15Q8WXK1 588 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 SIGLEC10Q96LC7 697 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 PTPN18Q99952 460 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 BCAS3Q9H6U6 928 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 DLL4Q9NR61 685 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 BTBD7Q9P203 1132 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 ARHGAP28Q9P2N2 729 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 NUDCQ9Y266 331 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 PIEZO1Q92508 2521 aa6.1□□□□□ -1.43
COPS3-204ENST00000462236 PHIPQ8WWQ0 1821 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.09□□□□□ -1.43
COPS3-204ENST00000462236 MAFO75444 373 aaPredicted RBP6.09□□□□□ -1.43
COPS3-204ENST00000462236 UFL1O94874 794 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 TMEM253P0C7T8 217 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 U2AF1L5P0DN76 240 aaPredicted RBP6.09□□□□□ -1.43
COPS3-204ENST00000462236 HSP90B1P14625 803 aaKnown RBP6.09□□□□□ -1.43
COPS3-204ENST00000462236 PTGS1P23219 599 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 STAT5AP42229 794 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 GUCY2FP51841 1108 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 FOXO4P98177 505 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 U2AF1Q01081 240 aaKnown RBP eCLIP6.09□□□□□ -1.43
COPS3-204ENST00000462236 EXOSC10Q01780 885 aaKnown RBP6.09□□□□□ -1.43
COPS3-204ENST00000462236 SP3Q02447 781 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 DACT2Q5SW24 774 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 BROXQ5VW32 411 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 FRMD7Q6ZUT3 714 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 LINC00482Q8N8I6 264 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 DTX3Q8N9I9 347 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 SMARCC2Q8TAQ2 1214 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 FAM89AQ96GI7 184 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 GBP4Q96PP9 640 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 FOXB1Q99853 325 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 ZMAT4Q9H898 229 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 BABAM1Q9NWV8 329 aa6.09□□□□□ -1.43
COPS3-204ENST00000462236 DDX56Q9NY93 547 aaKnown RBP6.09□□□□□ -1.43
COPS3-204ENST00000462236 H2AFY2Q9P0M6 372 aaPredicted RBP6.09□□□□□ -1.43
COPS3-204ENST00000462236 MYH13Q9UKX3 1938 aa6.09□□□□□ -1.44
COPS3-204ENST00000462236 MED23Q9ULK4 1368 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 XDHP47989 1333 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 A0A1W2PPC1 479 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 MMEP08473 750 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 PPP2R1AP30153 589 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 NF2P35240 595 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 ID4P47928 161 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 TMPRSS15P98073 1019 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 STRIP1Q5VSL9 837 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 IQSEC1Q6DN90 963 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 CXXC5Q7LFL8 322 aaKnown RBP6.08□□□□□ -1.44
COPS3-204ENST00000462236 RTN4RL1Q86UN2 441 aaPredicted RBP6.08□□□□□ -1.44
COPS3-204ENST00000462236 APOBEC3FQ8IUX4 373 aaKnown RBP6.08□□□□□ -1.44
COPS3-204ENST00000462236 PHYKPLQ8IUZ5 450 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 POU5F2Q8N7G0 328 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 KYQ8NBH2 561 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 HIPK4Q8NE63 616 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 PLBD2Q8NHP8 589 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 CALML6Q8TD86 181 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 CLMNQ96JQ2 1002 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 CFAP53Q96M91 514 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 CLIC6Q96NY7 704 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 WNT8AQ9H1J5 351 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 GALNT8Q9NY28 637 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 PLA2G2DQ9UNK4 145 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 FZD1Q9UP38 647 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 SPEF1Q9Y4P9 236 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 BDP1A6H8Y1 2624 aa6.08□□□□□ -1.44
COPS3-204ENST00000462236 MYO3BQ8WXR4 1341 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 FRMPD3Q5JV73 1810 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 DNAH12Q6ZR08 3092 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 ETV2O00321 342 aaPredicted RBP6.07□□□□□ -1.44
COPS3-204ENST00000462236 MAFGO15525 162 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 RAB11FIP3O75154 756 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 PDGFRBP09619 1106 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 EIF2S2P20042 333 aaKnown RBP6.07□□□□□ -1.44
COPS3-204ENST00000462236 PTX3P26022 381 aaPredicted RBP6.07□□□□□ -1.44
COPS3-204ENST00000462236 EPHB3P54753 998 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 PFKPQ01813 784 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 ALDH6A1Q02252 535 aaKnown RBP6.07□□□□□ -1.44
COPS3-204ENST00000462236 TTC38Q5R3I4 469 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 TIGD7Q6NT04 549 aaPredicted RBP6.07□□□□□ -1.44
COPS3-204ENST00000462236 ESRP1Q6NXG1 681 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms