RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 DRICH1Q6PGQ1 229 aaPredicted RBP7.22□□□□□ -1.25
CALD1-213ENST00000462181 PLEKHG4BQ96PX9 1271 aa7.22□□□□□ -1.25
CALD1-213ENST00000462181 ANKRD6Q9Y2G4 727 aa7.22□□□□□ -1.25
CALD1-213ENST00000462181 WNT10BO00744 389 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 PPM1GO15355 546 aaPredicted RBP7.21□□□□□ -1.26
CALD1-213ENST00000462181 S100BP04271 92 aaPredicted RBP7.21□□□□□ -1.26
CALD1-213ENST00000462181 PCSK1P29120 753 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 RAB27AP51159 221 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 EPHB1P54762 984 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 RAP2BP61225 183 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 CDC42EP1Q00587 391 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 OTUD7BQ6GQQ9 843 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 DBX2Q6ZNG2 339 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 ZGPATQ8N5A5 531 aaKnown RBP7.21□□□□□ -1.26
CALD1-213ENST00000462181 RNF169Q8NCN4 708 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 OR10H5Q8NGA6 315 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 RAB24Q969Q5 203 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 TMX3Q96JJ7 454 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 FAM193BQ96PV7 902 aaPredicted RBP7.21□□□□□ -1.26
CALD1-213ENST00000462181 NDC1Q9BTX1 674 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 ZNF703Q9H7S9 590 aaPredicted RBP7.21□□□□□ -1.26
CALD1-213ENST00000462181 TCF7L1Q9HCS4 588 aa7.21□□□□□ -1.26
CALD1-213ENST00000462181 EIF2B4Q9UI10 523 aaKnown RBP7.21□□□□□ -1.26
CALD1-213ENST00000462181 RUVBL1Q9Y265 456 aaKnown RBP7.21□□□□□ -1.26
CALD1-213ENST00000462181 SGTAO43765 313 aa7.2□□□□□ -1.26
CALD1-213ENST00000462181 RECQL4O94761 1208 aa7.2□□□□□ -1.26
CALD1-213ENST00000462181 AMHP03971 560 aa7.2□□□□□ -1.26
CALD1-213ENST00000462181 PF4V1P10720 104 aa7.2□□□□□ -1.26
CALD1-213ENST00000462181 CREMQ03060 361 aa7.2□□□□□ -1.26
CALD1-213ENST00000462181 FOXE3Q13461 319 aa7.2□□□□□ -1.26
CALD1-213ENST00000462181 MTM1Q13496 603 aa7.2□□□□□ -1.26
CALD1-213ENST00000462181 PIN1Q13526 163 aaPredicted RBP7.2□□□□□ -1.26
CALD1-213ENST00000462181 ATP2B3Q16720 1220 aa7.2□□□□□ -1.26
CALD1-213ENST00000462181 KAT5Q92993 513 aa7.2□□□□□ -1.26
CALD1-213ENST00000462181 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.2□□□□□ -1.26
CALD1-213ENST00000462181 SORCS3Q9UPU3 1222 aa7.2□□□□□ -1.26
CALD1-213ENST00000462181 AKAP10O43572 662 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 DTNBO60941 627 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 ABLIM3O94929 683 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 POMCP01189 267 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 ZSCAN20P17040 1043 aaPredicted RBP7.19□□□□□ -1.26
CALD1-213ENST00000462181 PDCP20941 246 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 ATP8B2P98198 1209 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 TARDBPQ13148 414 aaKnown RBP eCLIP7.19□□□□□ -1.26
CALD1-213ENST00000462181 CSRP2Q16527 193 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 RABL3Q5HYI8 236 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 TTC7BQ86TV6 843 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 DRC7Q8IY82 874 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 CPT1CQ8TCG5 803 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 CLPTM1LQ96KA5 538 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 PHACTR3Q96KR7 559 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 DCLRE1CQ96SD1 692 aaKnown RBP7.19□□□□□ -1.26
CALD1-213ENST00000462181 CEP72Q9P209 647 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 ZNF180Q9UJW8 692 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 PCDHB1Q9Y5F3 818 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 CFAP20Q9Y6A4 193 aaKnown RBP7.19□□□□□ -1.26
CALD1-213ENST00000462181 PNPLA7Q6ZV29 1317 aa7.19□□□□□ -1.26
CALD1-213ENST00000462181 FAM20BO75063 409 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 SCAF4O95104 1147 aaKnown RBP7.18□□□□□ -1.26
CALD1-213ENST00000462181 POU2F2P09086 479 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 C1SP09871 688 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 AKAP5P24588 427 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 APOBEC3AP31941 199 aaPredicted RBP7.18□□□□□ -1.26
CALD1-213ENST00000462181 CTXN1P60606 82 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 NHLH2Q02577 135 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 TOB2Q14106 344 aaPredicted RBP7.18□□□□□ -1.26
CALD1-213ENST00000462181 ZNF529Q6P280 563 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 GADL1Q6ZQY3 521 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 SEM1Q6ZVN7 128 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 GGNQ86UU5 652 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 ZNF503Q96F45 646 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 NUP88Q99567 741 aaPredicted RBP7.18□□□□□ -1.26
CALD1-213ENST00000462181 MYOCQ99972 504 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 VPS11Q9H270 941 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 SLC23A1Q9UHI7 598 aa7.18□□□□□ -1.26
CALD1-213ENST00000462181 DRGXA6NNA5 263 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 LEFTY2O00292 366 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 MATN3O15232 486 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 DGCR2P98153 550 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 RAB39AQ14964 217 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 UBXN2BQ14CS0 331 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 MIIPQ5JXC2 388 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 USP45Q70EL2 814 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 PLXDC1Q8IUK5 500 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 SYT12Q8IV01 421 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 JPH3Q8WXH2 748 aaPredicted RBP7.17□□□□□ -1.26
CALD1-213ENST00000462181 ZNF341Q9BYN7 854 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 C11orf54Q9H0W9 315 aaPredicted RBP7.17□□□□□ -1.26
CALD1-213ENST00000462181 ZIM2Q9NZV7 527 aa7.17□□□□□ -1.26
CALD1-213ENST00000462181 THRAP3Q9Y2W1 955 aaKnown RBP7.17□□□□□ -1.26
CALD1-213ENST00000462181 GRXCR1A8MXD5 290 aa7.16□□□□□ -1.26
CALD1-213ENST00000462181 DIRC3C9JPN6 131 aa7.16□□□□□ -1.26
CALD1-213ENST00000462181 TRIM24O15164 1050 aa7.16□□□□□ -1.26
CALD1-213ENST00000462181 CHN2P52757 468 aa7.16□□□□□ -1.26
CALD1-213ENST00000462181 MED25Q71SY5 747 aa7.16□□□□□ -1.26
CALD1-213ENST00000462181 UBE3BQ7Z3V4 1068 aa7.16□□□□□ -1.26
CALD1-213ENST00000462181 CATIPQ7Z7H3 387 aa7.16□□□□□ -1.26
CALD1-213ENST00000462181 IFI44Q8TCB0 444 aa7.16□□□□□ -1.26
CALD1-213ENST00000462181 MRGPRX4Q96LA9 322 aa7.16□□□□□ -1.26
CALD1-213ENST00000462181 RHOBTB2Q9BYZ6 727 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms