RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 WNT16Q9UBV4 365 aa19.67■□□□□ 0.74
SSB-206ENST00000461708 FBXW11Q9UKB1 542 aa19.67■□□□□ 0.74
SSB-206ENST00000461708 TNFSF13BQ9Y275 285 aa19.67■□□□□ 0.74
SSB-206ENST00000461708 SPTBN4Q9H254 2564 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 K7ERI5 159 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 ST18O60284 1047 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 RPL17P18621 184 aaKnown RBP19.66■□□□□ 0.74
SSB-206ENST00000461708 AOC1P19801 751 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 HOXA9P31269 272 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 PSMD5Q16401 504 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 DCLRE1AQ6PJP8 1040 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 PRSS55Q6UWB4 352 aaPredicted RBP19.66■□□□□ 0.74
SSB-206ENST00000461708 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.66■□□□□ 0.74
SSB-206ENST00000461708 RTL10Q7L3V2 364 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 KCTD17Q8N5Z5 321 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 UROC1Q96N76 676 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 PPP1R10Q96QC0 940 aaKnown RBP19.66■□□□□ 0.74
SSB-206ENST00000461708 MYADMQ96S97 322 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 KIFC3Q9BVG8 833 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 C17orf75Q9HAS0 396 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 CACNG4Q9UBN1 327 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 DNM3Q9UQ16 869 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 VWA8A3KMH1 1905 aa19.66■□□□□ 0.74
SSB-206ENST00000461708 DOCK6Q96HP0 2047 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 ANHXE9PGG2 379 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 H0Y858 1186 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 POU2F2P09086 479 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 LAMP2P13473 410 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 NPR3P17342 541 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 XKR4Q5GH76 650 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 KRT79Q5XKE5 535 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 CWF19L1Q69YN2 538 aaKnown RBP19.65■□□□□ 0.74
SSB-206ENST00000461708 SLC44A3Q8N4M1 653 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 SNX29Q8TEQ0 813 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 RTP3Q9BQQ7 232 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 CXCL16Q9H2A7 254 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 TMEM134Q9H6X4 195 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 FBXL21Q9UKT6 434 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 GDAQ9Y2T3 454 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 KIF3AQ9Y496 699 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 RBM19Q9Y4C8 960 aaKnown RBP19.65■□□□□ 0.74
SSB-206ENST00000461708 PCDHB6Q9Y5E3 794 aa19.65■□□□□ 0.74
SSB-206ENST00000461708 LIG1P18858 919 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 FGFR3P22607 806 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 NBL1P41271 181 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 NPTX2P47972 431 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 RAB33AQ14088 237 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 NBR1Q14596 966 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 LIN9Q5TKA1 542 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 HASPINQ8TF76 798 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 DRC1Q96MC2 740 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 TIPINQ9BVW5 301 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 TOPORSQ9NS56 1045 aaPredicted RBP19.64■□□□□ 0.73
SSB-206ENST00000461708 FAM86C1Q9NVL1 165 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 ARHGAP28Q9P2N2 729 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 KCNG1Q9UIX4 513 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 USP20Q9Y2K6 914 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 GVINP1Q7Z2Y8 2422 aa19.64■□□□□ 0.73
SSB-206ENST00000461708 TRAPPC3O43617 180 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 MYBP10242 640 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 SRFP11831 508 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 GRM5P41594 1212 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 DMP1Q13316 513 aaPredicted RBP19.63■□□□□ 0.73
SSB-206ENST00000461708 UPP1Q16831 310 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 UVSSAQ2YD98 709 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 ALKAL1Q6UXT8 129 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 DTHD1Q6ZMT9 781 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 CEP57Q86XR8 500 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 GLYCTKQ8IVS8 523 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 DAW1Q8N136 415 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 SIX5Q8N196 739 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 DDX27Q96GQ7 796 aaKnown RBP19.63■□□□□ 0.73
SSB-206ENST00000461708 ACO2Q99798 780 aaKnown RBP19.63■□□□□ 0.73
SSB-206ENST00000461708 NTPCRQ9BSD7 190 aaKnown RBP19.63■□□□□ 0.73
SSB-206ENST00000461708 MRPL4Q9BYD3 311 aaKnown RBP19.63■□□□□ 0.73
SSB-206ENST00000461708 PTPRHQ9HD43 1115 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.63■□□□□ 0.73
SSB-206ENST00000461708 MTRRQ9UBK8 725 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 BACE2Q9Y5Z0 518 aa19.63■□□□□ 0.73
SSB-206ENST00000461708 ZNF292O60281 2723 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 NARSO43776 548 aaKnown RBP19.62■□□□□ 0.73
SSB-206ENST00000461708 GFRA3O60609 400 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 B3GAT3O94766 335 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 PEX3P56589 373 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 HTR4Q13639 388 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 RABEP1Q15276 862 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 C8orf34Q49A92 452 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 RILPL1Q5EBL4 403 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 C1orf186Q6ZWK4 172 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 CCDC105Q8IYK2 499 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 FLCNQ8NFG4 579 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 RSAD2Q8WXG1 361 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 CCDC94Q9BW85 323 aaPredicted RBP19.62■□□□□ 0.73
SSB-206ENST00000461708 POLD4Q9HCU8 107 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 SLC38A7Q9NVC3 462 aa19.62■□□□□ 0.73
SSB-206ENST00000461708 SMIM28A0A1B0GU29 152 aa19.61■□□□□ 0.73
SSB-206ENST00000461708 CCDC169A6NNP5 214 aa19.61■□□□□ 0.73
SSB-206ENST00000461708 E9PMD0 336 aa19.61■□□□□ 0.73
SSB-206ENST00000461708 HIP1RO75146 1068 aa19.61■□□□□ 0.73
SSB-206ENST00000461708 XYLBO75191 536 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms