RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 ZC3H3Q8IXZ2 948 aaKnown RBP12.28□□□□□ -0.44
SSBP1-202ENST00000461433 XXYLT1Q8NBI6 393 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 SYAP1Q96A49 352 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-202ENST00000461433 ZMAT2Q96NC0 199 aaKnown RBP12.28□□□□□ -0.44
SSBP1-202ENST00000461433 DUSP9Q99956 384 aaKnown RBP12.28□□□□□ -0.44
SSBP1-202ENST00000461433 CWH43Q9H720 699 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 TBC1D13Q9NVG8 400 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 CNTN3Q9P232 1028 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 INPP5FQ9Y2H2 1132 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 NLRC5Q86WI3 1866 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 CHD9Q3L8U1 2897 aa12.28□□□□□ -0.44
SSBP1-202ENST00000461433 SMIM28A0A1B0GU29 152 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 LINC01553A4QN01 128 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 LACTBL1A8MY62 500 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 SOX1O00570 391 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-202ENST00000461433 DDHD2O94830 711 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 POMCP01189 267 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 CA3P07451 260 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 KCNE1P15382 129 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 CASP4P49662 377 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 YARSP54577 528 aaKnown RBP12.27□□□□□ -0.45
SSBP1-202ENST00000461433 STIM1Q13586 685 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 BTG3Q14201 252 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-202ENST00000461433 FOXR2Q6PJQ5 311 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 SPRED2Q7Z698 418 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 ZNF280BQ86YH2 543 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 ABI1Q8IZP0 508 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 NELFBQ8WX92 580 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 RSPH1Q8WYR4 309 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 RPF1Q9H9Y2 349 aaKnown RBP12.27□□□□□ -0.45
SSBP1-202ENST00000461433 PLEKHA5Q9HAU0 1116 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 TOPORSQ9NS56 1045 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-202ENST00000461433 CTNND2Q9UQB3 1225 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 MRPL42Q9Y6G3 142 aaKnown RBP12.27□□□□□ -0.45
SSBP1-202ENST00000461433 TRIOBPQ9H2D6 2365 aa12.27□□□□□ -0.45
SSBP1-202ENST00000461433 NR2F2P24468 414 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 DNAJB2P25686 324 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 TAP1Q03518 808 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 LRRC63Q05C16 580 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 DSC1Q08554 894 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 PAK1Q13153 545 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 RAB30Q15771 203 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 ZBTB6Q15916 424 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 SNRNP35Q16560 246 aaKnown RBP12.26□□□□□ -0.45
SSBP1-202ENST00000461433 GLRA4Q5JXX5 417 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 BRSK2Q8IWQ3 736 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 RDH13Q8NBN7 331 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 CLP1Q92989 425 aaKnown RBP12.26□□□□□ -0.45
SSBP1-202ENST00000461433 EEF2KMTQ96G04 330 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 PPP1R10Q96QC0 940 aaKnown RBP12.26□□□□□ -0.45
SSBP1-202ENST00000461433 FUCA2Q9BTY2 467 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 GZF1Q9H116 711 aaPredicted RBP12.26□□□□□ -0.45
SSBP1-202ENST00000461433 NKX2-4Q9H2Z4 354 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 NRDE2Q9H7Z3 1164 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 KIAA1586Q9HCI6 787 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 KANSL3Q9P2N6 904 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 ZNF233A6NK53 670 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 EXOC3O60645 756 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 STX17P56962 302 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 SPAG1Q07617 926 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 ADAM9Q13443 819 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 SASS6Q6UVJ0 657 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 COLGALT2Q8IYK4 626 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 LRRC43Q8N309 656 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 TMEM130Q8N3G9 435 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 FIBCD1Q8N539 461 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 URGCPQ8TCY9 931 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 PLEKHO2Q8TD55 490 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 MFSD14AQ96MC6 490 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 MRPL9Q9BYD2 267 aaKnown RBP12.26□□□□□ -0.45
SSBP1-202ENST00000461433 RBAKQ9NYW8 714 aaPredicted RBP12.26□□□□□ -0.45
SSBP1-202ENST00000461433 DNAJB4Q9UDY4 337 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 RWDD2AQ9UIY3 292 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 MSRAQ9UJ68 235 aa12.26□□□□□ -0.45
SSBP1-202ENST00000461433 CHD7Q9P2D1 2997 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 SYCE3A1L190 88 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 AKAP3O75969 853 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 LETM1O95202 739 aaPredicted RBP12.25□□□□□ -0.45
SSBP1-202ENST00000461433 THP07101 528 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 RPL13P26373 211 aaKnown RBP12.25□□□□□ -0.45
SSBP1-202ENST00000461433 ERCC5P28715 1186 aaPredicted RBP12.25□□□□□ -0.45
SSBP1-202ENST00000461433 MCCD1P59942 119 aaPredicted RBP12.25□□□□□ -0.45
SSBP1-202ENST00000461433 FKBP3Q00688 224 aaKnown RBP12.25□□□□□ -0.45
SSBP1-202ENST00000461433 PPP2R3AQ06190 1150 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 TYRO3Q06418 890 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 SOX4Q06945 474 aaPredicted RBP12.25□□□□□ -0.45
SSBP1-202ENST00000461433 CYP24A1Q07973 514 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 GRIK3Q13003 919 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 ZSCAN23Q3MJ62 389 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 JADE1Q6IE81 842 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 C11orf57Q6ZUT1 292 aaPredicted RBP12.25□□□□□ -0.45
SSBP1-202ENST00000461433 CD302Q8IX05 232 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 NOC3LQ8WTT2 800 aaKnown RBP12.25□□□□□ -0.45
SSBP1-202ENST00000461433 BORCS6Q96GS4 357 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 RPS6KC1Q96S38 1066 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 TSG101Q99816 390 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 ASB7Q9H672 318 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 PDE11AQ9HCR9 933 aa12.25□□□□□ -0.45
SSBP1-202ENST00000461433 BICDL2A1A5D9 508 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 MAPK13O15264 365 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms