RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CYP4F3Q08477 520 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 DHCR24Q15392 516 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 PUM3Q15397 648 aaKnown RBP5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 CFAP100Q494V2 611 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 DENND5AQ6IQ26 1287 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 PKN3Q6P5Z2 889 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 UBE2R2Q712K3 238 aaPredicted RBP5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 MIB1Q86YT6 1006 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 WDR66Q8TBY9 1149 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 DCAF4Q8WV16 495 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 ZBTB8AQ96BR9 441 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 RBM15Q96T37 977 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 DCTPP1Q9H773 170 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 TCEAL9Q9UHQ7 104 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 CASP8AP2Q9UKL3 1982 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 MED23Q9ULK4 1368 aa5.67□□□□□ -1.5
ATPAF1-203ENST00000460928 B4E1Z4 1266 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 AQP7O14520 342 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 RASGRP1O95267 797 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 CRTAMO95727 393 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 FUCA1P04066 466 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 NTRK1P04629 796 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 APPP05067 770 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 C8BP07358 591 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 SLC5A1P13866 664 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 MAGEA10P43363 369 aaPredicted RBP5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 SLC6A11P48066 632 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 IRX3P78415 501 aaPredicted RBP5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 SCRN1Q12765 414 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 UBE4AQ14139 1066 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 TBC1D10BQ4KMP7 808 aaPredicted RBP5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 DACT2Q5SW24 774 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 ANKRD45Q5TZF3 282 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 MBLAC2Q68D91 279 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 CDCA2Q69YH5 1023 aaPredicted RBP5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 ETV3LQ6ZN32 361 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 RAVER1Q8IY67 606 aaKnown RBP5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 KREMEN2Q8NCW0 462 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 SUPT20HQ8NEM7 779 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 TDRD7Q8NHU6 1098 aaKnown RBP5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 ADAMTS17Q8TE56 1095 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 LPIN2Q92539 896 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 EYA3Q99504 573 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 GORASP1Q9BQQ3 440 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 C11orf84Q9BUA3 381 aaPredicted RBP5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 CLEC1BQ9P126 229 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 PALD1Q9ULE6 856 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 PCDHA9Q9Y5H5 950 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 AKAP11Q9UKA4 1901 aa5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 POLR2AP24928 1970 aaKnown RBP5.66□□□□□ -1.5
ATPAF1-203ENST00000460928 ARAP2Q8WZ64 1704 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 GLTPD2A6NH11 291 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 BRINP1O60477 761 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 HMMRO75330 724 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 KATNA1O75449 491 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 IFIT1P09914 478 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 PLS3P13797 630 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 IL1R1P14778 569 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 RPL13P26373 211 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 THBS2P35442 1172 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 MCAMP43121 646 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 RGS3P49796 1198 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 HDAC1Q13547 482 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 TTF1Q15361 905 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 SEPT7Q16181 437 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 GORABQ5T7V8 394 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 RNF219Q5W0B1 726 aaPredicted RBP5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 TTLL5Q6EMB2 1281 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 KCNT2Q6UVM3 1135 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 LHFPL2Q6ZUX7 228 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 ZNF804AQ7Z570 1209 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 Q8N1Y9 231 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 ZNF384Q8TF68 577 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 SEC14L1Q92503 715 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 DPF3Q92784 378 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 DDX11Q96FC9 970 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 WNK4Q96J92 1243 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 GTPBP4Q9BZE4 634 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 LRRCC1Q9C099 1032 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 AP5M1Q9H0R1 490 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 BOLA2Q9H3K6 86 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 YY1AP1Q9H869 796 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 GPRC5CQ9NQ84 441 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 PIH1D3Q9NQM4 214 aaKnown RBP5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 SLC5A4Q9NY91 659 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 HMG20BQ9P0W2 317 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 HDAC5Q9UQL6 1122 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 SIT1Q9Y3P8 196 aa5.65□□□□□ -1.5
ATPAF1-203ENST00000460928 MYH13Q9UKX3 1938 aa5.65□□□□□ -1.51
ATPAF1-203ENST00000460928 THSD7BQ9C0I4 1608 aa5.65□□□□□ -1.51
ATPAF1-203ENST00000460928 GPR39O43194 453 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 FRAT2O75474 233 aaPredicted RBP5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 LETM1O95202 739 aaPredicted RBP5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 THBDP07204 575 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 NAT1P18440 290 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 PRDX5P30044 214 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 CACNB3P54284 484 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 EPHB1P54762 984 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 GUCY1A3Q02108 690 aa5.64□□□□□ -1.51
ATPAF1-203ENST00000460928 DMTNQ08495 405 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms