RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 ASIC4Q96FT7 647 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 HHIPL1Q96JK4 782 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 STRBPQ96SI9 672 aaKnown RBP5.74□□□□□ -1.49
SF3A3-202ENST00000460925 SLC13A1Q9BZW2 595 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 LSG1Q9H089 658 aaKnown RBP5.74□□□□□ -1.49
SF3A3-202ENST00000460925 CDH19Q9H159 772 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 EPB41L1Q9H4G0 881 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 VEZTQ9HBM0 779 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 CATSPERZQ9NTU4 200 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 FZD1Q9UP38 647 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 SLC4A4Q9Y6R1 1079 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 FLT1P17948 1338 aa5.74□□□□□ -1.49
SF3A3-202ENST00000460925 CNTNAP1P78357 1384 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 GPR75-ASB3A0A0A6YYF3 556 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 SLC12A8A0AV02 714 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 ADM5C9JUS6 153 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 HIP1O00291 1037 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 TGM5O43548 720 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 WDHD1O75717 1129 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 HSP90AA1P07900 732 aaKnown RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 ZFYP08048 801 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 HSPD1P10809 573 aaKnown RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 PAX3P23760 479 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 RPS12P25398 132 aaKnown RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 CALRP27797 417 aaKnown RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 EPHX2P34913 555 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 RAB27AP51159 221 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 ZNF280AP59817 542 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 PHC1P78364 1004 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 KRT85P78386 507 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 GSTO1P78417 241 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 PIN1Q13526 163 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 SHROOM1Q2M3G4 852 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 ZFYVE27Q5T4F4 411 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 MROH9Q5TGP6 573 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 ANGEL2Q5VTE6 544 aaKnown RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 ZSCAN25Q6NSZ9 544 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 CISD2Q8N5K1 135 aaKnown RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 SLC44A5Q8NCS7 719 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 MORC4Q8TE76 937 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 SLC5A5Q92911 643 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 ZBED3Q96IU2 234 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 CHAMP1Q96JM3 812 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 JAM3Q9BX67 310 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 TMEM39BQ9GZU3 492 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 INCENPQ9NQS7 918 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 HELLSQ9NRZ9 838 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 USP40Q9NVE5 1235 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 ZNF70Q9UC06 446 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 HACL1Q9UJ83 578 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 HDAC9Q9UKV0 1011 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 PALD1Q9ULE6 856 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 SPO11Q9Y5K1 396 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 RBM8AQ9Y5S9 174 aaKnown RBP5.73□□□□□ -1.49
SF3A3-202ENST00000460925 MYH4Q9Y623 1939 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 TRPM7Q96QT4 1865 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 TNKSO95271 1327 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 RAD50Q92878 1312 aa5.73□□□□□ -1.49
SF3A3-202ENST00000460925 PAPPA2Q9BXP8 1791 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 SSC5DA1L4H1 1573 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 DDTLA6NHG4 134 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-202ENST00000460925 H7C1D1 291 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 RFPL1O75677 317 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 ABLIM3O94929 683 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 LDHCP07864 332 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 ZGLP1P0C6A0 271 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 GNAT1P11488 350 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 CPA1P15085 419 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 TDO2P48775 406 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 TBX4P57082 545 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 JAM2P57087 298 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 DOC2BQ14184 412 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 ZKSCAN8Q15776 578 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-202ENST00000460925 FIGNQ5HY92 759 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 ARHGAP36Q6ZRI8 547 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 ZBTB46Q86UZ6 589 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 OSTM1Q86WC4 334 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 TBC1D10CQ8IV04 446 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 ANKS4BQ8N8V4 417 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 CLRN3Q8NCR9 226 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 CXorf38Q8TB03 319 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 RUFY2Q8WXA3 655 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 DPF2Q92785 391 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 DYNLL2Q96FJ2 89 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 TRMT2BQ96GJ1 504 aaKnown RBP5.72□□□□□ -1.49
SF3A3-202ENST00000460925 JMJD8Q96S16 334 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 KCNJ15Q99712 375 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 NOL10Q9BSC4 688 aaKnown RBP5.72□□□□□ -1.49
SF3A3-202ENST00000460925 YIPF4Q9BSR8 244 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 CRNKL1Q9BZJ0 848 aaKnown RBP5.72□□□□□ -1.49
SF3A3-202ENST00000460925 TAF1DQ9H5J8 278 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-202ENST00000460925 TCF7L1Q9HCS4 588 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 DCP1AQ9NPI6 582 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-202ENST00000460925 ADARB2Q9NS39 739 aaKnown RBP5.72□□□□□ -1.49
SF3A3-202ENST00000460925 ZIM2Q9NZV7 527 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 MARCH2Q9P0N8 246 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-202ENST00000460925 GULP1Q9UBP9 304 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 EBF1Q9UH73 591 aa5.72□□□□□ -1.49
SF3A3-202ENST00000460925 DOCK1Q14185 1865 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms