RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 GBX1Q14549 363 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 ACAP1Q15027 740 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 NOMO1Q15155 1222 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 GAGE13Q4V321 117 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 CYB5RLQ6IPT4 315 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 MRGPRGQ86SM5 289 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 ZNF480Q8WV37 535 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 GCDHQ92947 438 aaPredicted RBP4.42□□□□□ -1.7
RFC4-211ENST00000460408 ZG16BQ96DA0 208 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 MVB12AQ96EY5 273 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 GPHA2Q96T91 129 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 AGAP2Q99490 1192 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 ACO2Q99798 780 aaKnown RBP4.42□□□□□ -1.7
RFC4-211ENST00000460408 ENKD1Q9H0I2 346 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 SLC6A15Q9H2J7 730 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 TLR9Q9NR96 1032 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 SAP30BPQ9UHR5 308 aaKnown RBP4.42□□□□□ -1.7
RFC4-211ENST00000460408 NR2E1Q9Y466 385 aa4.42□□□□□ -1.7
RFC4-211ENST00000460408 PMS2P1A4D2B8 440 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 PRC1O43663 620 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 SGTAO43765 313 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 ENDOD1O94919 500 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 JUNP05412 331 aaKnown RBP4.41□□□□□ -1.7
RFC4-211ENST00000460408 ECHS1P30084 290 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 SREBF1P36956 1147 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 BPIFB4P59827 614 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 ATP2C1P98194 919 aaPredicted RBP4.41□□□□□ -1.7
RFC4-211ENST00000460408 FOXL1Q12952 345 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 SAFB2Q14151 953 aaKnown RBP eCLIP4.41□□□□□ -1.7
RFC4-211ENST00000460408 GALEQ14376 348 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 PGS1Q32NB8 556 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 FAM180AQ6UWF9 173 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 MIGA2Q7L4E1 593 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 DGKHQ86XP1 1220 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 ANKRD53Q8N9V6 530 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 OR14K1Q8NGZ2 314 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 HDAC10Q969S8 669 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 CRAMP1Q96RY5 1269 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 DMRTA2Q96SC8 542 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 MAP3K14Q99558 947 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 C12orf65Q9H3J6 166 aaKnown RBP4.41□□□□□ -1.7
RFC4-211ENST00000460408 BCO1Q9HAY6 547 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 GPRC5DQ9NZD1 345 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 GABBR1Q9UBS5 961 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 DDX20Q9UHI6 824 aaKnown RBP4.41□□□□□ -1.7
RFC4-211ENST00000460408 PCDHB1Q9Y5F3 818 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 DMRT1Q9Y5R6 373 aa4.41□□□□□ -1.7
RFC4-211ENST00000460408 CFAP20Q9Y6A4 193 aaKnown RBP4.41□□□□□ -1.7
RFC4-211ENST00000460408 A6NNZ2 444 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 H3BML4 177 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 WNT10BO00744 389 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 ADCY6O43306 1168 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 DTNBO60941 627 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 ITGA10O75578 1167 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 GASTP01350 101 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 ALDH2P05091 517 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 GYPEP15421 78 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 ADSLP30566 484 aaPredicted RBP4.4□□□□□ -1.71
RFC4-211ENST00000460408 HIBADHP31937 336 aaKnown RBP4.4□□□□□ -1.71
RFC4-211ENST00000460408 GUCY1A2P33402 732 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 CRHR1P34998 444 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 HLTFQ14527 1009 aaKnown RBP eCLIP4.4□□□□□ -1.71
RFC4-211ENST00000460408 GRM3Q14832 879 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 ZNF627Q7L945 461 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 OVCH2Q7RTZ1 564 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 ADGRE4PQ86SQ3 457 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 GRAMD1CQ8IYS0 662 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 TRMT2AQ8IZ69 625 aaKnown RBP4.4□□□□□ -1.71
RFC4-211ENST00000460408 OR7D4Q8NG98 312 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 NSUN6Q8TEA1 469 aaKnown RBP4.4□□□□□ -1.71
RFC4-211ENST00000460408 KAT5Q92993 513 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 C1GALT1C1Q96EU7 318 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 MRGPRX4Q96LA9 322 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 PRRX2Q99811 253 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 C7orf25Q9BPX7 421 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 PDCD2LQ9BRP1 358 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 WDR26Q9H7D7 661 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 PRDM11Q9NQV5 511 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 CEP72Q9P209 647 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.4□□□□□ -1.71
RFC4-211ENST00000460408 PCDHA13Q9Y5I0 950 aa4.4□□□□□ -1.71
RFC4-211ENST00000460408 SLC26A4O43511 780 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 AMY1AP04745 511 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 MSX2P35548 267 aaPredicted RBP4.39□□□□□ -1.71
RFC4-211ENST00000460408 ATP8B2P98198 1209 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 CDC42EP1Q00587 391 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 TARDBPQ13148 414 aaKnown RBP eCLIP4.39□□□□□ -1.71
RFC4-211ENST00000460408 CCSAPQ6IQ19 270 aaPredicted RBP4.39□□□□□ -1.71
RFC4-211ENST00000460408 CHST15Q7LFX5 561 aaPredicted RBP4.39□□□□□ -1.71
RFC4-211ENST00000460408 RHOT1Q8IXI2 618 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 ULK2Q8IYT8 1036 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 ZGPATQ8N5A5 531 aaKnown RBP4.39□□□□□ -1.71
RFC4-211ENST00000460408 ZBTB34Q8NCN2 500 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 RABGGTAQ92696 567 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 TIFAQ96CG3 184 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 RPL10LQ96L21 214 aaKnown RBP4.39□□□□□ -1.71
RFC4-211ENST00000460408 FAM193BQ96PV7 902 aaPredicted RBP4.39□□□□□ -1.71
RFC4-211ENST00000460408 LRFN3Q9BTN0 628 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 NELFAQ9H3P2 528 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 AGO3Q9H9G7 860 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms