RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 CXCL16Q9H2A7 254 aa23.38■■□□□ 1.33
ABCD4-202ENST00000460308 TLE6Q9H808 572 aa23.38■■□□□ 1.33
ABCD4-202ENST00000460308 TMEM206Q9H813 350 aa23.38■■□□□ 1.33
ABCD4-202ENST00000460308 A0A0B4J269 797 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 SMIM28A0A1B0GU29 152 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 ANKRD63C9JTQ0 380 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 FSCN2O14926 492 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 PRPF6O94906 941 aaKnown RBP23.37■■□□□ 1.33
ABCD4-202ENST00000460308 CASP5P51878 434 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 SMC1AQ14683 1233 aaKnown RBP23.37■■□□□ 1.33
ABCD4-202ENST00000460308 FAM26FQ5R3K3 315 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 SLC39A4Q6P5W5 647 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 ALKAL1Q6UXT8 129 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 RBM23Q86U06 439 aaKnown RBP23.37■■□□□ 1.33
ABCD4-202ENST00000460308 TMEM87AQ8NBN3 555 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 BCL7CQ8WUZ0 217 aaPredicted RBP23.37■■□□□ 1.33
ABCD4-202ENST00000460308 POMGNT1Q8WZA1 660 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 HPS3Q969F9 1004 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 SNX27Q96L92 541 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 GOLPH3LQ9H4A5 285 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 SLC38A7Q9NVC3 462 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 PCDHGC5Q9Y5F6 944 aa23.37■■□□□ 1.33
ABCD4-202ENST00000460308 CASTOR2A6NHX0 329 aa23.36■■□□□ 1.33
ABCD4-202ENST00000460308 ZNF202O95125 648 aa23.36■■□□□ 1.33
ABCD4-202ENST00000460308 CXCL14O95715 111 aa23.36■■□□□ 1.33
ABCD4-202ENST00000460308 MYL1P05976 194 aa23.36■■□□□ 1.33
ABCD4-202ENST00000460308 KCNA1Q09470 495 aa23.36■■□□□ 1.33
ABCD4-202ENST00000460308 FGFBP2Q9BYJ0 223 aa23.36■■□□□ 1.33
ABCD4-202ENST00000460308 RPF1Q9H9Y2 349 aaKnown RBP23.36■■□□□ 1.33
ABCD4-202ENST00000460308 PLEKHA5Q9HAU0 1116 aa23.36■■□□□ 1.33
ABCD4-202ENST00000460308 AGO2Q9UKV8 859 aaKnown RBP23.36■■□□□ 1.33
ABCD4-202ENST00000460308 ATG2AQ2TAZ0 1938 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 TADA2AO75478 443 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 CXCL8P10145 99 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 NRIP1P48552 1158 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 HYAL1Q12794 435 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 HSP90AA2PQ14568 343 aaPredicted RBP23.35■■□□□ 1.33
ABCD4-202ENST00000460308 SLC10A6Q3KNW5 377 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 XKR4Q5GH76 650 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 KRBA2Q6ZNG9 492 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 ADGRD2Q7Z7M1 963 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 RABGGTAQ92696 567 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 PPP1R10Q96QC0 940 aaKnown RBP23.35■■□□□ 1.33
ABCD4-202ENST00000460308 MARCH5Q9NX47 278 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 CLDND1Q9NY35 253 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 CNTN3Q9P232 1028 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 STYXL1Q9Y6J8 313 aa23.35■■□□□ 1.33
ABCD4-202ENST00000460308 TISP43B9A030 160 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 CTSAP10619 480 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 KCNE1P15382 129 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 TNFSF9P41273 254 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 PPP2R3AQ06190 1150 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 AAK1Q2M2I8 961 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 KANK3Q6NY19 840 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 MRPL43Q8N983 215 aaKnown RBP23.34■■□□□ 1.33
ABCD4-202ENST00000460308 CCDC47Q96A33 483 aaKnown RBP23.34■■□□□ 1.33
ABCD4-202ENST00000460308 PABPC5Q96DU9 382 aaKnown RBP23.34■■□□□ 1.33
ABCD4-202ENST00000460308 FAM212AQ96EL1 285 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 UROC1Q96N76 676 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 CDCA3Q99618 268 aaPredicted RBP23.34■■□□□ 1.33
ABCD4-202ENST00000460308 ZBP1Q9H171 429 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 IKZF4Q9H2S9 585 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 EXOC1Q9NV70 894 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 CACNG4Q9UBN1 327 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 ADAM28Q9UKQ2 775 aa23.34■■□□□ 1.33
ABCD4-202ENST00000460308 PER2O15055 1255 aa23.33■■□□□ 1.33
ABCD4-202ENST00000460308 EIF3DO15371 548 aaKnown RBP eCLIP23.33■■□□□ 1.33
ABCD4-202ENST00000460308 SOD2P04179 222 aa23.33■■□□□ 1.33
ABCD4-202ENST00000460308 NAB2Q15742 525 aa23.33■■□□□ 1.33
ABCD4-202ENST00000460308 ATXN2LQ8WWM7 1075 aaKnown RBP23.33■■□□□ 1.33
ABCD4-202ENST00000460308 ZMAT2Q96NC0 199 aaKnown RBP23.33■■□□□ 1.33
ABCD4-202ENST00000460308 PAAF1Q9BRP4 392 aa23.33■■□□□ 1.33
ABCD4-202ENST00000460308 UBE2ZQ9H832 354 aaPredicted RBP23.33■■□□□ 1.33
ABCD4-202ENST00000460308 SLC39A2Q9NP94 309 aa23.33■■□□□ 1.33
ABCD4-202ENST00000460308 SSX2IPQ9Y2D8 614 aa23.33■■□□□ 1.33
ABCD4-202ENST00000460308 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.32■■□□□ 1.32
ABCD4-202ENST00000460308 FSD2A1L4K1 749 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 HIDE1A8MVS5 230 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 F8W810 466 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 GARTP22102 1010 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 GTF2F1P35269 517 aaKnown RBP eCLIP23.32■■□□□ 1.32
ABCD4-202ENST00000460308 ACOT2P49753 483 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 MRPS5P82675 430 aaKnown RBP23.32■■□□□ 1.32
ABCD4-202ENST00000460308 EHHADHQ08426 723 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 PSMD2Q13200 908 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 ZBTB41Q5SVQ8 909 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 KIAA1841Q6NSI8 718 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 FUT10Q6P4F1 479 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 CD302Q8IX05 232 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 GLIS3Q8NEA6 775 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 ZNF507Q8TCN5 953 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 DDX27Q96GQ7 796 aaKnown RBP23.32■■□□□ 1.32
ABCD4-202ENST00000460308 VN1R3Q9BXE9 311 aa23.32■■□□□ 1.32
ABCD4-202ENST00000460308 MRPL17Q9NRX2 175 aaKnown RBP23.32■■□□□ 1.32
ABCD4-202ENST00000460308 CPSF3Q9UKF6 684 aaKnown RBP23.32■■□□□ 1.32
ABCD4-202ENST00000460308 BRWD1Q9NSI6 2320 aa23.31■■□□□ 1.32
ABCD4-202ENST00000460308 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.31■■□□□ 1.32
ABCD4-202ENST00000460308 TTC26A0AVF1 554 aa23.31■■□□□ 1.32
ABCD4-202ENST00000460308 C2orf71A6NGG8 1288 aa23.31■■□□□ 1.32
ABCD4-202ENST00000460308 LACTBL1A8MY62 500 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms