RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SPOPLQ6IQ16 392 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 GSTA5Q7RTV2 222 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 SULF1Q8IWU6 871 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 CYFIP2Q96F07 1278 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 STAMBPL1Q96FJ0 436 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 TARS2Q9BW92 718 aaKnown RBP16.48■□□□□ 0.23
LMNB1-203ENST00000460265 HOXC10Q9NYD6 342 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 ANAPC7Q9UJX3 599 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 UBIAD1Q9Y5Z9 338 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 DLEC1Q9Y238 1755 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 DNM1LO00429 736 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 CD19P15391 556 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 COMTP21964 271 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 TMOD1P28289 359 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 MAPK4P31152 587 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 KAZNQ674X7 775 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 TMEM270Q6UE05 265 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 TAB3Q8N5C8 712 aaPredicted RBP16.48■□□□□ 0.23
LMNB1-203ENST00000460265 MRRFQ96E11 262 aaKnown RBP16.48■□□□□ 0.23
LMNB1-203ENST00000460265 ZBTB45Q96K62 511 aaPredicted RBP16.48■□□□□ 0.23
LMNB1-203ENST00000460265 RAB20Q9NX57 234 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 FBXL5Q9UKA1 691 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 SBF2Q86WG5 1849 aa16.48■□□□□ 0.23
LMNB1-203ENST00000460265 RBAK-RBAKDNI3L0D1 243 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 PTPRAP18433 802 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 KCNA3P22001 575 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 TLDC1Q6P9B6 456 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 KDM7AQ6ZMT4 941 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 THNSL1Q8IYQ7 743 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 ZNF564Q8TBZ8 553 aaPredicted RBP16.47■□□□□ 0.23
LMNB1-203ENST00000460265 PLCD4Q9BRC7 762 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 MSTO1Q9BUK6 570 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 NOD2Q9HC29 1040 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 IGSF9BQ9UPX0 1349 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 DHX15O43143 795 aaKnown RBP16.47■□□□□ 0.23
LMNB1-203ENST00000460265 NSFP46459 744 aaKnown RBP16.47■□□□□ 0.23
LMNB1-203ENST00000460265 ERVK-9P63128 1117 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 ALCAMQ13740 583 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 BRDTQ58F21 947 aaPredicted RBP16.47■□□□□ 0.23
LMNB1-203ENST00000460265 SCARA5Q6ZMJ2 495 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 SV2AQ7L0J3 742 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 CCDC60Q8IWA6 550 aaPredicted RBP16.47■□□□□ 0.23
LMNB1-203ENST00000460265 INPP4AQ96PE3 977 aaPredicted RBP16.47■□□□□ 0.23
LMNB1-203ENST00000460265 ZNF302Q9NR11 478 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 GTPBP10A4D1E9 387 aaKnown RBP16.47■□□□□ 0.23
LMNB1-203ENST00000460265 INO80B-WBP1J3KQ70 363 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 CALCOCO2Q13137 446 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 SUPT20HL1Q3ZLR7 823 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 ARMC3Q5W041 872 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 CPLX4Q7Z7G2 160 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 NT5DC3Q86UY8 548 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 C4orf19Q8IY42 314 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 CACNA2D3Q8IZS8 1091 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 C11orf70Q9BRQ4 267 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 INO80BQ9C086 356 aaPredicted RBP16.47■□□□□ 0.23
LMNB1-203ENST00000460265 ZMYM2Q9UBW7 1377 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 TRPC6Q9Y210 931 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 NR2E1Q9Y466 385 aa16.47■□□□□ 0.23
LMNB1-203ENST00000460265 TMEM253P0C7T8 217 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 PRKCIP41743 596 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 TFAMQ00059 246 aaKnown RBP16.46■□□□□ 0.23
LMNB1-203ENST00000460265 RHOT2Q8IXI1 618 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 MCPH1Q8NEM0 835 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 KRT35Q92764 455 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 NLRP4Q96MN2 994 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 NOVA2Q9UNW9 492 aaKnown RBP16.46■□□□□ 0.23
LMNB1-203ENST00000460265 PHF20L1A8MW92 1017 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 MARCKSL1P49006 195 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 TRPC3Q13507 836 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 TMEM132BQ14DG7 1078 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 VSIG10LQ86VR7 867 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 TRPM4Q8TD43 1214 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 C1orf54Q8WWF1 131 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 PLVAPQ9BX97 442 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 RAB17Q9H0T7 212 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 SYNCQ9H7C4 482 aa16.46■□□□□ 0.23
LMNB1-203ENST00000460265 NXF1Q9UBU9 619 aaKnown RBP16.46■□□□□ 0.23
LMNB1-203ENST00000460265 AGO2Q9UKV8 859 aaKnown RBP16.46■□□□□ 0.23
LMNB1-203ENST00000460265 SCTRP47872 440 aa16.46■□□□□ 0.22
LMNB1-203ENST00000460265 EAPPQ56P03 285 aaPredicted RBP16.46■□□□□ 0.22
LMNB1-203ENST00000460265 FOXR2Q6PJQ5 311 aa16.46■□□□□ 0.22
LMNB1-203ENST00000460265 GPD1LQ8N335 351 aa16.46■□□□□ 0.22
LMNB1-203ENST00000460265 ARFGAP2Q8N6H7 521 aa16.46■□□□□ 0.22
LMNB1-203ENST00000460265 DYDC1Q8WWB3 177 aa16.46■□□□□ 0.22
LMNB1-203ENST00000460265 ITFG2Q969R8 447 aa16.46■□□□□ 0.22
LMNB1-203ENST00000460265 FMO2Q99518 471 aa16.46■□□□□ 0.22
LMNB1-203ENST00000460265 OSBPL7Q9BZF2 842 aa16.46■□□□□ 0.22
LMNB1-203ENST00000460265 EIF4E1BA6NMX2 242 aaKnown RBP16.45■□□□□ 0.22
LMNB1-203ENST00000460265 NFKBIEO00221 500 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 THAP12O43422 761 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 DGAT1O75907 488 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 ADCY1Q08828 1119 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 MAGEC3Q8TD91 643 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 WHAMMQ8TF30 809 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 BSNDQ8WZ55 320 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 SEMA4DQ92854 862 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 DCPSQ96C86 337 aaKnown RBP16.45■□□□□ 0.22
LMNB1-203ENST00000460265 CDHR1Q96JP9 859 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 ELP3Q9H9T3 547 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms