RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 GOLGA8IPA6NC78 632 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 GOLGA8JA6NMD2 632 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 KCNJ18B7U540 433 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 TISP43B9A030 160 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 AKAP3O75969 853 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 EDN1P05305 212 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 ADRB2P07550 413 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 TMEM191BP0C7N4 346 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 KCNE1P15382 129 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 CYP3A5P20815 502 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 BMP8BP34820 402 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 MAGEA10P43363 369 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-206ENST00000460235 WDR5P61964 334 aaKnown RBP13.38□□□□□ -0.27
HDAC4-206ENST00000460235 GRIK3Q13003 919 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 KCNJ12Q14500 433 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 TMEM132DQ14C87 1099 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 ENOX2Q16206 610 aaKnown RBP13.38□□□□□ -0.27
HDAC4-206ENST00000460235 NOMO2Q5JPE7 1267 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 TCERG1LQ5VWI1 586 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 ZNF598Q86UK7 904 aaKnown RBP13.38□□□□□ -0.27
HDAC4-206ENST00000460235 RTN4RL1Q86UN2 441 aaPredicted RBP13.38□□□□□ -0.27
HDAC4-206ENST00000460235 CBWD2Q8IUF1 395 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 DDX27Q96GQ7 796 aaKnown RBP13.38□□□□□ -0.27
HDAC4-206ENST00000460235 SNX27Q96L92 541 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 CNOT6LQ96LI5 555 aaKnown RBP13.38□□□□□ -0.27
HDAC4-206ENST00000460235 UROC1Q96N76 676 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 FANCLQ9NW38 375 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 CNTN3Q9P232 1028 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 UBQLN1Q9UMX0 589 aaKnown RBP13.38□□□□□ -0.27
HDAC4-206ENST00000460235 INSL6Q9Y581 213 aa13.38□□□□□ -0.27
HDAC4-206ENST00000460235 ARHGEF37A1IGU5 675 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 INPPL1O15357 1258 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 P4HA2O15460 535 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 CBFA2T2O43439 604 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 FAM189A1O60320 539 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 PHACTR2O75167 634 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 CAPN15O75808 1086 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 SERPINC1P01008 464 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 CXCL8P10145 99 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 DLATP10515 647 aaKnown RBP13.37□□□□□ -0.27
HDAC4-206ENST00000460235 ATP2A2P16615 1042 aaKnown RBP13.37□□□□□ -0.27
HDAC4-206ENST00000460235 ATF7P17544 494 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-206ENST00000460235 IBSPP21815 317 aaPredicted RBP13.37□□□□□ -0.27
HDAC4-206ENST00000460235 IQCB1Q15051 598 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 MAN2A1Q16706 1144 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 SLC10A6Q3KNW5 377 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 TCP11X2Q5H9J9 407 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 FKBP15Q5T1M5 1219 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 DHX40Q8IX18 779 aaKnown RBP13.37□□□□□ -0.27
HDAC4-206ENST00000460235 LRRC43Q8N309 656 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 PARD3BQ8TEW8 1205 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 CCDC127Q96BQ5 260 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 KIF12Q96FN5 646 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 RNPC3Q96LT9 517 aaKnown RBP13.37□□□□□ -0.27
HDAC4-206ENST00000460235 YME1L1Q96TA2 773 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 CGRRF1Q99675 332 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
HDAC4-206ENST00000460235 IMPG2Q9BZV3 1241 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 AAASQ9NRG9 546 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 STK39Q9UEW8 545 aa13.37□□□□□ -0.27
HDAC4-206ENST00000460235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-206ENST00000460235 ARL5CA6NH57 179 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 LACTBL1A8MY62 500 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 H0YGN5 161 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
HDAC4-206ENST00000460235 OFD1O75665 1012 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 UPP2O95045 317 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 AKAP5P24588 427 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 RPL9P32969 192 aaKnown RBP13.36□□□□□ -0.27
HDAC4-206ENST00000460235 PNPLA4P41247 253 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 CASP4P49662 377 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 TFAMQ00059 246 aaKnown RBP13.36□□□□□ -0.27
HDAC4-206ENST00000460235 TRPC3Q13507 836 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 XKR4Q5GH76 650 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 DCAF17Q5H9S7 520 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-206ENST00000460235 CDKAL1Q5VV42 579 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 CRELD2Q6UXH1 353 aaPredicted RBP13.36□□□□□ -0.27
HDAC4-206ENST00000460235 ALKAL1Q6UXT8 129 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 AGMOQ6ZNB7 445 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 LUZP1Q86V48 1076 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 CMTR2Q8IYT2 770 aaKnown RBP13.36□□□□□ -0.27
HDAC4-206ENST00000460235 GAD1Q99259 594 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 TUBGCP2Q9BSJ2 902 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 OSBPL7Q9BZF2 842 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 DNAI2Q9GZS0 605 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 HAPLN2Q9GZV7 340 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 ITGA11Q9UKX5 1188 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 RWDD3Q9Y3V2 267 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 HES2Q9Y543 173 aa13.36□□□□□ -0.27
HDAC4-206ENST00000460235 ALPK3Q96L96 1907 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 SMIM28A0A1B0GU29 152 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 LRRC10BA6NIK2 292 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 PMM2O15305 246 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 DGKIO75912 1065 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 AFPP02771 609 aaKnown RBP13.35□□□□□ -0.27
HDAC4-206ENST00000460235 MLH1P40692 756 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 TNFSF9P41273 254 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 MCCD1P59942 119 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-206ENST00000460235 CLDN10P78369 228 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 MYO1EQ12965 1108 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms