RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 GJB2P29033 226 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 CDC25AP30304 524 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 AVPR2P30518 371 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 MCM2P49736 904 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 MAPK7Q13164 816 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 HYIQ5T013 277 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 FAM171A1Q5VUB5 890 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 RINT1Q6NUQ1 792 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 LILRA6Q6PI73 481 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 PRSS55Q6UWB4 352 aaPredicted RBP25.03■■□□□ 1.6
PTPN4-207ENST00000460162 GLYCTKQ8IVS8 523 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 ZNF707Q96C28 371 aaPredicted RBP25.03■■□□□ 1.6
PTPN4-207ENST00000460162 MRPL4Q9BYD3 311 aaKnown RBP25.03■■□□□ 1.6
PTPN4-207ENST00000460162 DOCK8Q8NF50 2099 aa25.03■■□□□ 1.6
PTPN4-207ENST00000460162 CITO14578 2027 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 H3BQV1 296 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 CD2BP2O95400 341 aaKnown RBP25.02■■□□□ 1.6
PTPN4-207ENST00000460162 SPATA31D3P0C874 917 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 RPL17P18621 184 aaKnown RBP25.02■■□□□ 1.6
PTPN4-207ENST00000460162 GRM5P41594 1212 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 NUBP1P53384 320 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 PSMD5Q16401 504 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 ZNF568Q3ZCX4 644 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 SPATA31D4Q6ZUB0 917 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 C1orf186Q6ZWK4 172 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 KCNK18Q7Z418 384 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 ALYREFQ86V81 257 aaKnown RBP25.02■■□□□ 1.6
PTPN4-207ENST00000460162 UROC1Q96N76 676 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 PPP1R10Q96QC0 940 aaKnown RBP25.02■■□□□ 1.6
PTPN4-207ENST00000460162 NT5C3AQ9H0P0 336 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 CDT1Q9H211 546 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 KMT5AQ9NQR1 393 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 TOPORSQ9NS56 1045 aaPredicted RBP25.02■■□□□ 1.6
PTPN4-207ENST00000460162 IGSF9Q9P2J2 1179 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 FBXW11Q9UKB1 542 aa25.02■■□□□ 1.6
PTPN4-207ENST00000460162 RBM19Q9Y4C8 960 aaKnown RBP25.02■■□□□ 1.6
PTPN4-207ENST00000460162 GUCY2CP25092 1073 aa25.01■■□□□ 1.59
PTPN4-207ENST00000460162 MRE11P49959 708 aa25.01■■□□□ 1.59
PTPN4-207ENST00000460162 TDGQ13569 410 aa25.01■■□□□ 1.59
PTPN4-207ENST00000460162 GLRA4Q5JXX5 417 aa25.01■■□□□ 1.59
PTPN4-207ENST00000460162 ARL6IP4Q66PJ3 421 aaKnown RBP25.01■■□□□ 1.59
PTPN4-207ENST00000460162 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.01■■□□□ 1.59
PTPN4-207ENST00000460162 ACO2Q99798 780 aaKnown RBP25.01■■□□□ 1.59
PTPN4-207ENST00000460162 CCDC94Q9BW85 323 aaPredicted RBP25.01■■□□□ 1.59
PTPN4-207ENST00000460162 PIDD1Q9HB75 910 aa25.01■■□□□ 1.59
PTPN4-207ENST00000460162 PTPRHQ9HD43 1115 aa25.01■■□□□ 1.59
PTPN4-207ENST00000460162 DUSP12Q9UNI6 340 aa25.01■■□□□ 1.59
PTPN4-207ENST00000460162 N4BP1O75113 896 aaKnown RBP25■■□□□ 1.59
PTPN4-207ENST00000460162 ZMYND10O75800 440 aa25■■□□□ 1.59
PTPN4-207ENST00000460162 MYBP10242 640 aa25■■□□□ 1.59
PTPN4-207ENST00000460162 YARSP54577 528 aaKnown RBP25■■□□□ 1.59
PTPN4-207ENST00000460162 TCF15Q12870 199 aa25■■□□□ 1.59
PTPN4-207ENST00000460162 TAS1R3Q7RTX0 852 aa25■■□□□ 1.59
PTPN4-207ENST00000460162 CEP57Q86XR8 500 aa25■■□□□ 1.59
PTPN4-207ENST00000460162 LNX1Q8TBB1 728 aaPredicted RBP25■■□□□ 1.59
PTPN4-207ENST00000460162 PRKD2Q9BZL6 878 aa25■■□□□ 1.59
PTPN4-207ENST00000460162 KCNK12Q9HB15 430 aa25■■□□□ 1.59
PTPN4-207ENST00000460162 EPS15L1Q9UBC2 864 aa25■■□□□ 1.59
PTPN4-207ENST00000460162 PDCD11Q14690 1871 aaKnown RBP25■■□□□ 1.59
PTPN4-207ENST00000460162 CACNA1HO95180 2353 aa24.99■■□□□ 1.59
PTPN4-207ENST00000460162 GBP2P32456 591 aaPredicted RBP24.99■■□□□ 1.59
PTPN4-207ENST00000460162 LIN9Q5TKA1 542 aa24.99■■□□□ 1.59
PTPN4-207ENST00000460162 CEP120Q8N960 986 aa24.99■■□□□ 1.59
PTPN4-207ENST00000460162 CLSTN3Q9BQT9 956 aa24.99■■□□□ 1.59
PTPN4-207ENST00000460162 KCND2Q9NZV8 630 aa24.99■■□□□ 1.59
PTPN4-207ENST00000460162 KCNG1Q9UIX4 513 aa24.99■■□□□ 1.59
PTPN4-207ENST00000460162 VWA3AA6NCI4 1184 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 B3GAT3O94766 335 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 MCF2P10911 925 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 PROZP22891 400 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 CLCNKBP51801 687 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 ZRSR1Q15695 479 aaKnown RBP24.98■■□□□ 1.59
PTPN4-207ENST00000460162 UPP1Q16831 310 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 XKR4Q5GH76 650 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 DCLRE1AQ6PJP8 1040 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 SYT2Q8N9I0 419 aaPredicted RBP24.98■■□□□ 1.59
PTPN4-207ENST00000460162 SPIRE2Q8WWL2 714 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 CDK5RAP3Q96JB5 506 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 PNMA5Q96PV4 448 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 TARS2Q9BW92 718 aaKnown RBP24.98■■□□□ 1.59
PTPN4-207ENST00000460162 IRF2BPLQ9H1B7 796 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 SMC3Q9UQE7 1217 aa24.98■■□□□ 1.59
PTPN4-207ENST00000460162 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.98■■□□□ 1.59
PTPN4-207ENST00000460162 SLC16A4O15374 487 aa24.97■■□□□ 1.59
PTPN4-207ENST00000460162 HNRNPA1P09651 372 aaKnown RBP eCLIP24.97■■□□□ 1.59
PTPN4-207ENST00000460162 FGFR3P22607 806 aa24.97■■□□□ 1.59
PTPN4-207ENST00000460162 MPZL3Q6UWV2 235 aa24.97■■□□□ 1.59
PTPN4-207ENST00000460162 SNX27Q96L92 541 aa24.97■■□□□ 1.59
PTPN4-207ENST00000460162 NTPCRQ9BSD7 190 aaKnown RBP24.97■■□□□ 1.59
PTPN4-207ENST00000460162 MFSD1Q9H3U5 465 aa24.97■■□□□ 1.59
PTPN4-207ENST00000460162 SLC38A7Q9NVC3 462 aa24.97■■□□□ 1.59
PTPN4-207ENST00000460162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.97■■□□□ 1.59
PTPN4-207ENST00000460162 SMIM28A0A1B0GU29 152 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 ABLIM1O14639 778 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 SLC26A4O43511 780 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 TRAPPC3O43617 180 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 PLS3P13797 630 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 HOXA9P31269 272 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 STRN3Q13033 797 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 TMEM119Q4V9L6 283 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms