RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 DGKDQ16760 1214 aa16.97■□□□□ 0.31
CMTM3-203ENST00000460097 TDRD12Q587J7 1177 aaKnown RBP16.97■□□□□ 0.31
CMTM3-203ENST00000460097 GLT1D1Q96MS3 346 aa16.97■□□□□ 0.31
CMTM3-203ENST00000460097 UIMC1Q96RL1 719 aa16.97■□□□□ 0.31
CMTM3-203ENST00000460097 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.97■□□□□ 0.312e-6■■□□□ 14.2
CMTM3-203ENST00000460097 CCDC134Q9H6E4 229 aa16.97■□□□□ 0.31
CMTM3-203ENST00000460097 JPH1Q9HDC5 661 aaPredicted RBP16.97■□□□□ 0.31
CMTM3-203ENST00000460097 TBC1D22BQ9NU19 505 aa16.97■□□□□ 0.31
CMTM3-203ENST00000460097 INTUQ9ULD6 942 aa16.97■□□□□ 0.31
CMTM3-203ENST00000460097 CABYRO75952 493 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 MYL3P08590 195 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 RGS19P49795 217 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 NPEPPSP55786 919 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 SP4Q02446 784 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 ERMARDQ5T6L9 678 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 CXCL17Q6UXB2 119 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 SLFN11Q7Z7L1 901 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 LRRC57Q8N9N7 239 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 CCDC26Q8TAB7 109 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 VTI1AQ96AJ9 217 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 BLOC1S4Q9NUP1 217 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 MYH10P35580 1976 aa16.96■□□□□ 0.31
CMTM3-203ENST00000460097 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-203ENST00000460097 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 MYMKA6NI61 221 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 SLC37A4O43826 429 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 HPDP32754 393 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-203ENST00000460097 PURAQ00577 322 aaKnown RBP16.95■□□□□ 0.3
CMTM3-203ENST00000460097 SATB1Q01826 763 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 HLTFQ14527 1009 aaKnown RBP eCLIP16.95■□□□□ 0.3
CMTM3-203ENST00000460097 HOOK3Q86VS8 718 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 LMBR1Q8WVP7 490 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 CHMP6Q96FZ7 201 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 GPR20Q99678 358 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 TXLNGYQ9BZA5 131 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 FAM129AQ9BZQ8 928 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 SLC39A2Q9NP94 309 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 SLC9A2Q9UBY0 812 aa16.95■□□□□ 0.3
CMTM3-203ENST00000460097 CCDC189A1A4V9 331 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 CCT8L1PA6NM43 557 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 DHX15O43143 795 aaKnown RBP16.94■□□□□ 0.3
CMTM3-203ENST00000460097 RTN2O75298 545 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 PPFIA2O75334 1257 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 FTCDO95954 541 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 NUDT17P0C025 328 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 CALRP27797 417 aaKnown RBP16.94■□□□□ 0.3
CMTM3-203ENST00000460097 GRB10Q13322 594 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 CLUL1Q15846 466 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 KIAA0753Q2KHM9 967 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 TMC3Q7Z5M5 1100 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 TRIM59Q8IWR1 403 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 ANKS4BQ8N8V4 417 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 CEP120Q8N960 986 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 SEPT1Q8WYJ6 367 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 LARP4BQ92615 738 aaKnown RBP16.94■□□□□ 0.3
CMTM3-203ENST00000460097 HVCN1Q96D96 273 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 MTMR9Q96QG7 549 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 MTG1Q9BT17 334 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-203ENST00000460097 RAB34Q9BZG1 259 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 EBF2Q9HAK2 575 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 STARD7Q9NQZ5 370 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 SUCLA2Q9P2R7 463 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-203ENST00000460097 SLC12A4Q9UP95 1085 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 DDX39AO00148 427 aaKnown RBP16.94■□□□□ 0.3
CMTM3-203ENST00000460097 MARCH6O60337 910 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 QPCTQ16769 361 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 TMEM119Q4V9L6 283 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 MYOCDQ8IZQ8 938 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 CCDC197Q8NCU1 140 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 ETNPPLQ8TBG4 499 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 SLC5A5Q92911 643 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 PGM2Q96G03 612 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 FAM20AQ96MK3 541 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 XPO6Q96QU8 1125 aaKnown RBP16.94■□□□□ 0.3
CMTM3-203ENST00000460097 PLIN2Q99541 437 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 RIT2Q99578 217 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 HAUS2Q9NVX0 235 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 TCEAL9Q9UHQ7 104 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 NENFQ9UMX5 172 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 TELO2Q9Y4R8 837 aa16.94■□□□□ 0.3
CMTM3-203ENST00000460097 F8VZ95 297 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 PPP1R12AO14974 1030 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-203ENST00000460097 TBX3O15119 743 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 SART1O43290 800 aaKnown RBP16.93■□□□□ 0.3
CMTM3-203ENST00000460097 GAS7O60861 476 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 GFPT2O94808 682 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 HOXD8P13378 290 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-203ENST00000460097 PRKCIP41743 596 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 ATN1P54259 1190 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-203ENST00000460097 ELF3P78545 371 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-203ENST00000460097 ASIC2Q16515 512 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 LRCH2Q5VUJ6 765 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 SLC39A5Q6ZMH5 540 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 PPP4R3CPQ6ZMV5 832 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 PIGWQ7Z7B1 504 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 SYCE1Q8N0S2 351 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 RAD54LQ92698 747 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 GJA10Q969M2 543 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 KCNMB3Q9NPA1 279 aa16.93■□□□□ 0.3
CMTM3-203ENST00000460097 FBXL5Q9UKA1 691 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms