RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PTK2Q05397 1052 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 TRIM32Q13049 653 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 DRP2Q13474 957 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 TMEM132DQ14C87 1099 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 PTPN14Q15678 1187 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 IFI16Q16666 785 aaKnown RBP6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZNF667Q5HYK9 610 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 MIIPQ5JXC2 388 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 MARCH8Q5T0T0 291 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 C10orf76Q5T2E6 689 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 RPAINQ86UA6 219 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 SERINC5Q86VE9 423 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 IRF2BP1Q8IU81 584 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 CBWD2Q8IUF1 395 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 ABI1Q8IZP0 508 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 ANKLE1Q8NAG6 615 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 JAKMIP2Q96AA8 810 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 KIF12Q96FN5 646 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 CPB2Q96IY4 423 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 FBXL18Q96ME1 805 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 MED15Q96RN5 788 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 CEP89Q96ST8 783 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 CGRRF1Q99675 332 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 FGFBP2Q9BYJ0 223 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 STK33Q9BYT3 514 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 TSGA10Q9BZW7 698 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 CCDC113Q9H0I3 377 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 UNC93B1Q9H1C4 597 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 HSD3B7Q9H2F3 369 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 PDE11AQ9HCR9 933 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 UBE2TQ9NPD8 197 aaPredicted RBP6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 SEPT11Q9NVA2 429 aaKnown RBP6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 RAB20Q9NX57 234 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 APEX2Q9UBZ4 518 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 FBXL5Q9UKA1 691 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 PHF24Q9UPV7 400 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 DERAQ9Y315 318 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 CEP83Q9Y592 693 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZMYM2Q9UBW7 1377 aa6.3□□□□□ -1.4
RNU1-88P-201ENST00000459274 FRMPD3Q5JV73 1810 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 TRIP11Q15643 1979 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 TDRD15B5MCY1 1934 aaKnown RBP6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 TTC26A0AVF1 554 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 MYADML2A6NDP7 307 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 HOXA2O43364 376 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 MED7O43513 233 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 TSPAN1O60635 241 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 GPR32O75388 356 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 SGPL1O95470 568 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 IGHA2P01877 340 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 GJB1P08034 283 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 CTSHP09668 335 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 TRIM49P0CI25 452 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 TRIM49CP0CI26 452 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 KRT5P13647 590 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 UCHL3P15374 230 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 PAX3P23760 479 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 ANXA13P27216 316 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 ATICP31939 592 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 PNPLA4P41247 253 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 GRM5P41594 1212 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 KCNJ6P48051 423 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 PDE6CP51160 858 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 LBX1P52954 281 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 RBP5P82980 135 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 CDK17Q00537 523 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 KIF5AQ12840 1032 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 LRMPQ12912 555 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 MKRN4PQ13434 485 aaPredicted RBP6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 ENOX2Q16206 610 aaKnown RBP6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 ARHGAP44Q17R89 818 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 KLHDC7AQ5VTJ3 777 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 SMYD5Q6GMV2 418 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 GDF6Q6KF10 455 aaPredicted RBP6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 TRIM65Q6PJ69 517 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 NECAB2Q7Z6G3 386 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 BRSK2Q8IWQ3 736 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 MSANTD4Q8NCY6 345 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 URGCPQ8TCY9 931 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 RSPH1Q8WYR4 309 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 SEPT8Q92599 483 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 DHX38Q92620 1227 aaKnown RBP6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 APBB2Q92870 758 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 FAXDC2Q96IV6 333 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZBTB45Q96K62 511 aaPredicted RBP6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZNF560Q96MR9 790 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 ZNF830Q96NB3 372 aaPredicted RBP6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 MMS19Q96T76 1030 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 APOL6Q9BWW8 343 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 INTS2Q9H0H0 1204 aaKnown RBP6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 FAM124BQ9H5Z6 455 aaPredicted RBP6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 AGPAT5Q9NUQ2 364 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 KANSL3Q9P2N6 904 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 DNAJC12Q9UKB3 198 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 CPSF3Q9UKF6 684 aaKnown RBP6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 ITGA11Q9UKX5 1188 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 UBQLN1Q9UMX0 589 aaKnown RBP6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 PLAGL2Q9UPG8 496 aa6.29□□□□□ -1.4
RNU1-88P-201ENST00000459274 MYH10P35580 1976 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms