RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 GINM1Q9NU53 330 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 TBC1D7Q9P0N9 293 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 PCDHA6Q9UN73 950 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 EFR3BQ9Y2G0 817 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 PCDHA8Q9Y5H6 950 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 SSU72P8A0A1W2PR75 194 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 KANSL1LA0AUZ9 987 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 ZSCAN5CA6NGD5 496 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 RGS16O15492 202 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 CBFA2T3O75081 653 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 VARSP26640 1264 aaKnown RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 STIP1P31948 543 aaKnown RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 ATP2C1P98194 919 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 ORC2Q13416 577 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 CNGA2Q16280 664 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 P3H1Q32P28 736 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 MEI1Q5TIA1 1274 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 RRAGBQ5VZM2 374 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 ARL6IP4Q66PJ3 421 aaKnown RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 TMEM53Q6P2H8 277 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 ZC3H18Q86VM9 953 aaKnown RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 APOBEC3FQ8IUX4 373 aaKnown RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 GPC2Q8N158 579 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 CTNNBL1Q8WYA6 563 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 ZNF184Q99676 751 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 FHDC1Q9C0D6 1143 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 QPCTLQ9NXS2 382 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 SCHIP1Q9P0W5 487 aaPredicted RBP12.11□□□□□ -0.47
DDX39B-214ENST00000458640 TFR2Q9UP52 801 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 ZNF541Q9H0D2 1346 aa12.11□□□□□ -0.47
DDX39B-214ENST00000458640 GOLGB1Q14789 3259 aaKnown RBP12.1□□□□□ -0.47
DDX39B-214ENST00000458640 DCDC2CA8MYV0 355 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 LAD1O00515 517 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 ZNF263O14978 683 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 NDUFB10O96000 172 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 EIF2S1P05198 315 aaKnown RBP12.1□□□□□ -0.47
DDX39B-214ENST00000458640 BMP3P12645 472 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 MARK3P27448 753 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 ATP5DP30049 168 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 CXCR5P32302 372 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 CAP2P40123 477 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 MAGEA1P43355 309 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 KIF11P52732 1056 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 MAP3K10Q02779 954 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 IKQ13123 557 aaPredicted RBP12.1□□□□□ -0.47
DDX39B-214ENST00000458640 HSP90AA5PQ58FG0 334 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 PHLDB3Q6NSJ2 640 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 LRRC74BQ6ZQY2 392 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 NELFBQ8WX92 580 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 TAF4BQ92750 862 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 MTMR8Q96EF0 704 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 AGBL1Q96MI9 1066 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 ROPN1BQ9BZX4 212 aaPredicted RBP12.1□□□□□ -0.47
DDX39B-214ENST00000458640 MLXIPQ9HAP2 919 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 ROPN1Q9HAT0 212 aaPredicted RBP12.1□□□□□ -0.47
DDX39B-214ENST00000458640 HESX1Q9UBX0 185 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 MYPNQ86TC9 1320 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 RBAK-RBAKDNI3L0D1 243 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 MATN2O00339 956 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 DCTN3O75935 186 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 SBF1O95248 1867 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 MCM7P33993 719 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 YARSP54577 528 aaKnown RBP12.1□□□□□ -0.47
DDX39B-214ENST00000458640 ARPC4P59998 168 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 CYP27A1Q02318 531 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 DHX9Q08211 1270 aaKnown RBP12.1□□□□□ -0.47
DDX39B-214ENST00000458640 PTGDRQ13258 359 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 ZNF174Q15697 407 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 SHROOM1Q2M3G4 852 aaPredicted RBP12.1□□□□□ -0.47
DDX39B-214ENST00000458640 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 ZNF280DQ6N043 979 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 INTS8Q75QN2 995 aaKnown RBP12.1□□□□□ -0.47
DDX39B-214ENST00000458640 SIAH1Q8IUQ4 282 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 FAM186BQ8IYM0 893 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 SCAIQ8N9R8 606 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 SIKE1Q9BRV8 207 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 PABPC3Q9H361 631 aaKnown RBP12.1□□□□□ -0.47
DDX39B-214ENST00000458640 ETNK2Q9NVF9 386 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 STX18Q9P2W9 335 aaKnown RBP12.1□□□□□ -0.47
DDX39B-214ENST00000458640 DNAJB4Q9UDY4 337 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 LNPEPQ9UIQ6 1025 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 STXBP5LQ9Y2K9 1186 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 TMX2Q9Y320 296 aa12.1□□□□□ -0.47
DDX39B-214ENST00000458640 GTPBP6O43824 516 aaPredicted RBP12.09□□□□□ -0.47
DDX39B-214ENST00000458640 SHBGP04278 402 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 SLC16A2P36021 539 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 PPP1R2P41236 205 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 PRELPP51888 382 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 GIT2Q14161 759 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 TBC1D10BQ4KMP7 808 aaPredicted RBP12.09□□□□□ -0.47
DDX39B-214ENST00000458640 ZCWPW2Q504Y3 356 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 DCAF15Q66K64 600 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 MFSD5Q6N075 450 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 B3GNT6Q6ZMB0 384 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 MIGA2Q7L4E1 593 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 SAMD7Q7Z3H4 446 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 NANOGNBQ7Z5D8 188 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 NEK8Q86SG6 692 aa12.09□□□□□ -0.47
DDX39B-214ENST00000458640 NEK9Q8TD19 979 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms