RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 KCNG4Q8TDN1 519 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 FGF13Q92913 245 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 BORCS6Q96GS4 357 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 RPP25Q9BUL9 199 aaKnown RBP11.53□□□□□ -0.56
HDLBP-227ENST00000458564 OSBPL6Q9BZF3 934 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 FOXQ1Q9C009 403 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 CCDC113Q9H0I3 377 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 TUFT1Q9NNX1 390 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 CACNA1IQ9P0X4 2223 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 NCOR2Q9Y618 2525 aa11.53□□□□□ -0.56
HDLBP-227ENST00000458564 KANSL1LA0AUZ9 987 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 BTBD18B2RXH4 712 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 ADAM12O43184 909 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 TXKP42681 527 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 MAGEA9P43362 315 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 GPC5P78333 572 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 PRKCQQ04759 706 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 RAB33AQ14088 237 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 MAPK6Q16659 721 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 ZNF528Q3MIS6 628 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 SPECC1Q5M775 1068 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 RSPO2Q6UXX9 243 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-227ENST00000458564 CATSPER3Q86XQ3 398 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 DIS3L2Q8IYB7 885 aaKnown RBP11.52□□□□□ -0.57
HDLBP-227ENST00000458564 MAML2Q8IZL2 1156 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-227ENST00000458564 HASPINQ8TF76 798 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 RUBCNQ92622 972 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 GTF3C6Q969F1 213 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 RMDN1Q96DB5 314 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 ADPGKQ9BRR6 497 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 POLR3CQ9BUI4 534 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-227ENST00000458564 SNTG2Q9NY99 539 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 MTRRQ9UBK8 725 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 KCNH3Q9ULD8 1083 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 DOCK6Q96HP0 2047 aa11.52□□□□□ -0.57
HDLBP-227ENST00000458564 ACKR2O00590 384 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 DTNBO60941 627 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 ATP2B1P20020 1258 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 FGFR3P22607 806 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 NAMPTP43490 491 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 NTHL1P78549 312 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 PFKPQ01813 784 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 PRPF4BQ13523 1007 aaKnown RBP11.51□□□□□ -0.57
HDLBP-227ENST00000458564 MLF2Q15773 248 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-227ENST00000458564 DCAF4L1Q3SXM0 396 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 AXDND1Q5T1B0 1012 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-227ENST00000458564 CEP57Q86XR8 500 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 NPAS3Q8IXF0 933 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 SUMF1Q8NBK3 374 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 NSUN7Q8NE18 718 aaKnown RBP11.51□□□□□ -0.57
HDLBP-227ENST00000458564 SLC7A14Q8TBB6 771 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 BSNDQ8WZ55 320 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 NACC1Q96RE7 527 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 TMEM60Q9H2L4 133 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 AVENQ9NQS1 362 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-227ENST00000458564 FBXO4Q9UKT5 387 aa11.51□□□□□ -0.57
HDLBP-227ENST00000458564 VWA8A3KMH1 1905 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 MYH15Q9Y2K3 1946 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 A0A087WWV3 80 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 SPTLC1O15269 473 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 CCL16O15467 120 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 MED24O75448 989 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 EDN1P05305 212 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 PRKCBP05771 671 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 CYP11B2P19099 503 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 MUTP22033 750 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 RPA1P27694 616 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 ORC2Q13416 577 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-227ENST00000458564 PUM1Q14671 1186 aaKnown RBP eCLIP11.5□□□□□ -0.576e-11■■■■□ 24.2
HDLBP-227ENST00000458564 PPP2R5AQ15172 486 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 ME3Q16798 604 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 PABPC1LQ4VXU2 614 aaKnown RBP11.5□□□□□ -0.57
HDLBP-227ENST00000458564 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 NOSTRINQ8IVI9 506 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 KIAA2013Q8IYS2 634 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 ITFG1Q8TB96 612 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 UROC1Q96N76 676 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 PPP1R10Q96QC0 940 aaKnown RBP11.5□□□□□ -0.57
HDLBP-227ENST00000458564 BCO2Q9BYV7 579 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 CXCL16Q9H2A7 254 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 DLL3Q9NYJ7 618 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 GDE1Q9NZC3 331 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 BACE2Q9Y5Z0 518 aa11.5□□□□□ -0.57
HDLBP-227ENST00000458564 MIA3Q5JRA6 1907 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 NOTCH4Q99466 2003 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 TRAPPC3O43617 180 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 KINO60870 393 aaKnown RBP11.49□□□□□ -0.57
HDLBP-227ENST00000458564 LRRN2O75325 713 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 ECI2O75521 394 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 B3GAT3O94766 335 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 LARGE1O95461 756 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 OR1D2P34982 312 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 EFNA5P52803 228 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 SNW1Q13573 536 aaKnown RBP11.49□□□□□ -0.57
HDLBP-227ENST00000458564 TRIM29Q14134 588 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 UPP1Q16831 310 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 SLC44A4Q53GD3 710 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 EEF1DP3Q658K8 133 aa11.49□□□□□ -0.57
HDLBP-227ENST00000458564 SLC8B1Q6J4K2 584 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms