RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 PANK4Q9NVE7 773 aa20.43■□□□□ 0.86
USP39-209ENST00000458268 ADAM28Q9UKQ2 775 aa20.43■□□□□ 0.86
USP39-209ENST00000458268 ZMYM2Q9UBW7 1377 aa20.43■□□□□ 0.86
USP39-209ENST00000458268 ABLIM1O14639 778 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 POLR2DO15514 142 aaKnown RBP20.42■□□□□ 0.86
USP39-209ENST00000458268 CLASP2O75122 1294 aaKnown RBP20.42■□□□□ 0.86
USP39-209ENST00000458268 KIF4AO95239 1232 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 SOD2P04179 222 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 GAP43P17677 238 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 PROZP22891 400 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 SSTR3P32745 418 aaPredicted RBP20.42■□□□□ 0.86
USP39-209ENST00000458268 GLUD2P49448 558 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 ASIC1P78348 528 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 SPAG1Q07617 926 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 PTPN14Q15678 1187 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 AXDND1Q5T1B0 1012 aaPredicted RBP20.42■□□□□ 0.86
USP39-209ENST00000458268 CEP57Q86XR8 500 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 NOC3LQ8WTT2 800 aaKnown RBP20.42■□□□□ 0.86
USP39-209ENST00000458268 DNAJC19Q96DA6 116 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 SNX27Q96L92 541 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 HERC2P3Q9BVR0 1158 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 CLEC1BQ9P126 229 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 FAM50BQ9Y247 325 aa20.42■□□□□ 0.86
USP39-209ENST00000458268 TISP43B9A030 160 aa20.41■□□□□ 0.86
USP39-209ENST00000458268 CXCL8P10145 99 aa20.41■□□□□ 0.86
USP39-209ENST00000458268 KLRC2P26717 231 aa20.41■□□□□ 0.86
USP39-209ENST00000458268 COL19A1Q14993 1142 aa20.41■□□□□ 0.86
USP39-209ENST00000458268 IQUBQ8NA54 791 aa20.41■□□□□ 0.86
USP39-209ENST00000458268 MSTO1Q9BUK6 570 aa20.41■□□□□ 0.86
USP39-209ENST00000458268 EMILIN2Q9BXX0 1053 aa20.41■□□□□ 0.86
USP39-209ENST00000458268 GPR62Q9BZJ7 368 aa20.41■□□□□ 0.86
USP39-209ENST00000458268 HAPLN2Q9GZV7 340 aa20.41■□□□□ 0.86
USP39-209ENST00000458268 IKZF4Q9H2S9 585 aa20.41■□□□□ 0.86
USP39-209ENST00000458268 HCFC2Q9Y5Z7 792 aa20.41■□□□□ 0.86
USP39-209ENST00000458268 PDCD11Q14690 1871 aaKnown RBP20.41■□□□□ 0.86
USP39-209ENST00000458268 SMIM28A0A1B0GU29 152 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 GRXCR2A6NFK2 248 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 MBTPS2O43462 519 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 EPCAMP16422 314 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 TNFSF9P41273 254 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 AFMP43652 599 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 MCL1Q07820 350 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 E2F4Q16254 413 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 PUS10Q3MIT2 529 aaKnown RBP20.4■□□□□ 0.86
USP39-209ENST00000458268 MAP4K3Q8IVH8 894 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 CCDC65Q8IXS2 484 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 LEO1Q8WVC0 666 aaPredicted RBP20.4■□□□□ 0.86
USP39-209ENST00000458268 PPP1R10Q96QC0 940 aaKnown RBP20.4■□□□□ 0.86
USP39-209ENST00000458268 FIZ1Q96SL8 496 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 RCOR1Q9UKL0 485 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 ATP6V1DQ9Y5K8 247 aa20.4■□□□□ 0.86
USP39-209ENST00000458268 SF3B1O75533 1304 aaKnown RBP eCLIP20.39■□□□□ 0.853e-9■■■■■ 206.8
USP39-209ENST00000458268 FSD2A1L4K1 749 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 ANKRD63C9JTQ0 380 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 CASP1P29466 404 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 CLCNKBP51801 687 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 GTF2BQ00403 316 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 SMAD4Q13485 552 aaKnown RBP20.39■□□□□ 0.85
USP39-209ENST00000458268 ZBTB41Q5SVQ8 909 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 FAM171A1Q5VUB5 890 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 RESP18Q5W5W9 173 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 SYCP3Q8IZU3 236 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 RIN2Q8WYP3 895 aaPredicted RBP20.39■□□□□ 0.85
USP39-209ENST00000458268 CASP10Q92851 521 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 HPS3Q969F9 1004 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 C18orf25Q96B23 403 aaPredicted RBP20.39■□□□□ 0.85
USP39-209ENST00000458268 KLHL5Q96PQ7 755 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 LRRC27Q9C0I9 530 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 BLZF1Q9H2G9 400 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 TNMDQ9H2S6 317 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 GDPD2Q9HCC8 539 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 SEL1LQ9UBV2 794 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 STK39Q9UEW8 545 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 PLXNA3P51805 1871 aa20.39■□□□□ 0.85
USP39-209ENST00000458268 A0A1B0GVL5 298 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 I3L4J1 428 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 TNFRSF10AO00220 468 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 B3GAT3O94766 335 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 CNPP09543 421 aaKnown RBP20.38■□□□□ 0.85
USP39-209ENST00000458268 RPL17P18621 184 aaKnown RBP20.38■□□□□ 0.85
USP39-209ENST00000458268 CASP5P51878 434 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 AMPD3Q01432 767 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 PPP2R3AQ06190 1150 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 SOX4Q06945 474 aaPredicted RBP20.38■□□□□ 0.85
USP39-209ENST00000458268 COASYQ13057 564 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 NAB2Q15742 525 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 USP41Q3LFD5 358 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 RARS2Q5T160 578 aaKnown RBP20.38■□□□□ 0.85
USP39-209ENST00000458268 ADALQ6DHV7 355 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 ANKRD54Q6NXT1 300 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 SLC39A4Q6P5W5 647 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 PRSS55Q6UWB4 352 aaPredicted RBP20.38■□□□□ 0.85
USP39-209ENST00000458268 ZNF720Q7Z2F6 126 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 GRAMD1CQ8IYS0 662 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 TMEM130Q8N3G9 435 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 C12orf76Q8N812 135 aaPredicted RBP20.38■□□□□ 0.85
USP39-209ENST00000458268 MSLNLQ96KJ4 702 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 ZMAT2Q96NC0 199 aaKnown RBP20.38■□□□□ 0.85
USP39-209ENST00000458268 FGFBP2Q9BYJ0 223 aa20.38■□□□□ 0.85
USP39-209ENST00000458268 CUEDC2Q9H467 287 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms