RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 LTBRP36941 435 aa25.32■■□□□ 1.64
CBX3-204ENST00000456948 NUCB2P80303 420 aa25.32■■□□□ 1.64
CBX3-204ENST00000456948 ELAVL2Q12926 359 aaKnown RBP25.32■■□□□ 1.64
CBX3-204ENST00000456948 ZNF720Q7Z2F6 126 aa25.32■■□□□ 1.64
CBX3-204ENST00000456948 SFR1Q86XK3 245 aa25.32■■□□□ 1.64
CBX3-204ENST00000456948 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.32■■□□□ 1.64
CBX3-204ENST00000456948 BCL7CQ8WUZ0 217 aaPredicted RBP25.32■■□□□ 1.64
CBX3-204ENST00000456948 ZBTB45Q96K62 511 aaPredicted RBP25.32■■□□□ 1.64
CBX3-204ENST00000456948 PANK4Q9NVE7 773 aa25.32■■□□□ 1.64
CBX3-204ENST00000456948 POLR2DO15514 142 aaKnown RBP25.31■■□□□ 1.64
CBX3-204ENST00000456948 LINC01565O15544 149 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 PIGRP01833 764 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 CLTAP09496 248 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 HOXB8P17481 243 aaPredicted RBP25.31■■□□□ 1.64
CBX3-204ENST00000456948 NMT1P30419 496 aaKnown RBP25.31■■□□□ 1.64
CBX3-204ENST00000456948 GLUD2P49448 558 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 USP41Q3LFD5 358 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 ELMSAN1Q6PJG2 1045 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 TMEM184AQ6ZMB5 413 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 MAP4K3Q8IVH8 894 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 DNAJC19Q96DA6 116 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 DDX27Q96GQ7 796 aaKnown RBP25.31■■□□□ 1.64
CBX3-204ENST00000456948 HERC2P3Q9BVR0 1158 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 PLEKHA5Q9HAU0 1116 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 MARCH5Q9NX47 278 aa25.31■■□□□ 1.64
CBX3-204ENST00000456948 SF3B1O75533 1304 aaKnown RBP eCLIP25.31■■□□□ 1.643e-6■■■□□ 15.6
CBX3-204ENST00000456948 A0A087X0B3 334 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 SMIM28A0A1B0GU29 152 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 CASTOR2A6NHX0 329 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 CREMQ03060 361 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 COASYQ13057 564 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 SMAD4Q13485 552 aaKnown RBP25.3■■□□□ 1.64
CBX3-204ENST00000456948 POSTNQ15063 836 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 RESP18Q5W5W9 173 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 DCLRE1AQ6PJP8 1040 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 GPR65Q8IYL9 337 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 CEP57L1Q8IYX8 460 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 CEP120Q8N960 986 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 OLFML3Q9NRN5 406 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.3■■□□□ 1.64
CBX3-204ENST00000456948 KBTBD4Q9NVX7 518 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 DPP7Q9UHL4 492 aa25.3■■□□□ 1.64
CBX3-204ENST00000456948 ABLIM1O14639 778 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 TRAPPC3O43617 180 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 TBX10O75333 385 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 GCNT3O95395 438 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 KLRC2P26717 231 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 DLX2Q07687 328 aaPredicted RBP25.29■■□□□ 1.64
CBX3-204ENST00000456948 PTPN14Q15678 1187 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 TPRNQ4KMQ1 711 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 XKR4Q5GH76 650 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 ADALQ6DHV7 355 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 FUT10Q6P4F1 479 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 ALKAL1Q6UXT8 129 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 LEO1Q8WVC0 666 aaPredicted RBP25.29■■□□□ 1.64
CBX3-204ENST00000456948 PPP1R10Q96QC0 940 aaKnown RBP25.29■■□□□ 1.64
CBX3-204ENST00000456948 ACCSQ96QU6 501 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 TSPAN18Q96SJ8 248 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 MSTO1Q9BUK6 570 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 KCNH3Q9ULD8 1083 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 ZDHHC9Q9Y397 364 aa25.29■■□□□ 1.64
CBX3-204ENST00000456948 OGTO15294 1046 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 XPOTO43592 962 aaKnown RBP25.28■■□□□ 1.64
CBX3-204ENST00000456948 CLASP2O75122 1294 aaKnown RBP25.28■■□□□ 1.64
CBX3-204ENST00000456948 KCNE1P15382 129 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 CLUL1Q15846 466 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 E2F4Q16254 413 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 GLRA4Q5JXX5 417 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 LLGL2Q6P1M3 1020 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 PDXDC1Q6P996 788 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 SYCP3Q8IZU3 236 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 AUTS2Q8WXX7 1259 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 SNX27Q96L92 541 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 FIZ1Q96SL8 496 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 VN1R3Q9BXE9 311 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 RPF1Q9H9Y2 349 aaKnown RBP25.28■■□□□ 1.64
CBX3-204ENST00000456948 CLEC1BQ9P126 229 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 CNTN3Q9P232 1028 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 PRKAG3Q9UGI9 489 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 BARX2Q9UMQ3 279 aaPredicted RBP25.28■■□□□ 1.64
CBX3-204ENST00000456948 NCOR1O75376 2440 aa25.28■■□□□ 1.64
CBX3-204ENST00000456948 CITO14578 2027 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 FRMD3A2A2Y4 597 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 C2CD2LO14523 706 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 B3GAT3O94766 335 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 ADH1AP07327 375 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 CMA1P23946 247 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 RPL9P32969 192 aaKnown RBP25.27■■□□□ 1.64
CBX3-204ENST00000456948 DSG1Q02413 1049 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 PPP2R3AQ06190 1150 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 ZC2HC1CQ53FD0 456 aaPredicted RBP25.27■■□□□ 1.64
CBX3-204ENST00000456948 CD302Q8IX05 232 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 MSLNLQ96KJ4 702 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 TMEM206Q9H813 350 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 DZANK1Q9NVP4 752 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 TBC1D7Q9P0N9 293 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 USP25Q9UHP3 1055 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 HCFC2Q9Y5Z7 792 aa25.27■■□□□ 1.64
CBX3-204ENST00000456948 SPDYE4A6NLX3 237 aa25.26■■□□□ 1.63
CBX3-204ENST00000456948 MBTPS2O43462 519 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms