RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NELFEP18615 380 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 FKBP3Q00688 224 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 CCDC15Q0P6D6 951 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 NONOQ15233 471 aaKnown RBP eCLIP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 SLC9C1Q4G0N8 1177 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 ARL6IP4Q66PJ3 421 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 IQCEQ6IPM2 695 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 SH2D5Q6ZV89 423 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 RAPH1Q70E73 1250 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 RBBP8NLQ8NC74 664 aaPredicted RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 RBM15BQ8NDT2 890 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 GSTCDQ8NEC7 633 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 JDP2Q8WYK2 163 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 P3H4Q92791 437 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 HIC2Q96JB3 615 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 TGS1Q96RS0 853 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 RBM15Q96T37 977 aaKnown RBP eCLIP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 CORO1BQ9BR76 489 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 TMEM109Q9BVC6 243 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 LSM14BQ9BX40 385 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 TP53BP1Q12888 1972 aaPredicted RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 FDX1P10109 184 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 EIF4BP23588 611 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 NLRP5P59047 1200 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 IFFO1Q0D2I5 559 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 TBL3Q12788 808 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 CUL1Q13616 776 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 TGFBIQ15582 683 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 TMEM214Q6NUQ4 689 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 PEX26Q7Z412 305 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 ACTRT2Q8TDY3 377 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 MZB1Q8WU39 189 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 COA7Q96BR5 231 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 PTCD3Q96EY7 689 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 BICD1Q96G01 975 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 PGLYRP2Q96PD5 576 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 RUSC1Q9BVN2 902 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 RMI1Q9H9A7 625 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 CORINQ9Y5Q5 1042 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 ZMYM2Q9UBW7 1377 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 LRRD1A4D1F6 860 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 AXIN1O15169 862 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 CLIC2O15247 247 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 ASLP04424 464 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 BCRP11274 1271 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 CD247P20963 164 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 JAM2P57087 298 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 DLG4P78352 724 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 SPIRE1Q08AE8 756 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 CCDC142Q17RM4 750 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 C1orf141Q5JVX7 400 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 LRRC74BQ6ZQY2 392 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 CCDC84Q86UT8 332 aaPredicted RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 CABP7Q86V35 215 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 TRABD2AQ86V40 505 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 SEPT12Q8IYM1 358 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 TBCKQ8TEA7 893 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 MRRFQ96E11 262 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 ZNF778Q96MU6 729 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 NT5C1BQ96P26 610 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 MAD2L2Q9UI95 211 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 ZFC3H1O60293 1989 aaKnown RBP4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 CLUHO75153 1309 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 MROH7Q68CQ1 1323 aa4.85□□□□□ -1.63
DEPDC1-202ENST00000456315 POTEB3A0JP26 581 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 A6NNZ2 444 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 POTECB2RU33 542 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 PIK3R2O00459 728 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 LIN7AO14910 233 aaPredicted RBP4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 ADCY6O43306 1168 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 TTC4O95801 387 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 VAV1P15498 845 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 ACADSP16219 412 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 PEX2P28328 305 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 CPOXP36551 454 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 LONP1P36776 959 aaKnown RBP4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 STAT3P40763 770 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 RP1P56715 2156 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 NR1H3Q13133 447 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 IFIT5Q13325 482 aaKnown RBP4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 NCOA4Q13772 614 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 TLR1Q15399 786 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 TUBB8Q3ZCM7 444 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 POTEBQ6S5H4 581 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 LILRA2Q8N149 483 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 POMGNT1Q8WZA1 660 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 LRRC45Q96CN5 670 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 DYDC2Q96IM9 177 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 FNBP1Q96RU3 617 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 EBF4Q9BQW3 602 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 CARD9Q9H257 536 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 GOPCQ9HD26 462 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 KMT5AQ9NQR1 393 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 USH1CQ9Y6N9 552 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 MAST2Q6P0Q8 1798 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 SPATA31A1Q5TZJ5 1347 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 FRMPD2Q68DX3 1309 aaPredicted RBP4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 ATAD5Q96QE3 1844 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 HMX2A2RU54 273 aa4.84□□□□□ -1.63
DEPDC1-202ENST00000456315 CFAP69A5D8W1 941 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms