RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 UNC13DQ70J99 1090 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 CATSPER3Q86XQ3 398 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 UCMAQ8WVF2 138 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 DDX12PQ92771 950 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 GATA6Q92908 595 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 TLCD1Q96CP7 247 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 ATG4CQ96DT6 458 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 DHTKD1Q96HY7 919 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-218ENST00000456174 CHP1Q99653 195 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 JADE2Q9NQC1 790 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 TBCCD1Q9NVR7 557 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 SAMD15Q9P1V8 674 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 COL20A1Q9P218 1284 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 VAV3Q9UKW4 847 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 PNMA2Q9UL42 364 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 ZMYND8Q9ULU4 1186 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-218ENST00000456174 TBC1D30Q9Y2I9 924 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 HYOU1Q9Y4L1 999 aa8.16□□□□□ -1.1
HDAC9-218ENST00000456174 TRIM49BA6NDI0 452 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 BTBD19C9JJ37 291 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 SUPT3HO75486 399 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 TJP3O95049 919 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 GLI1P08151 1106 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 CCNB1P14635 433 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 RPA1P27694 616 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 STIP1P31948 543 aaKnown RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 GHRHRQ02643 423 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 P3H1Q32P28 736 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 SLC44A4Q53GD3 710 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 DUS1LQ6P1R4 473 aaKnown RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 TMEM53Q6P2H8 277 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 LONP2Q86WA8 852 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 ANKRD13AQ8IZ07 590 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 RNF10Q8N5U6 811 aaKnown RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 CASKIN2Q8WXE0 1202 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 SLC5A5Q92911 643 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 BHMTQ93088 406 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 ABHD8Q96I13 439 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 WNK4Q96J92 1243 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 CLMNQ96JQ2 1002 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 DNAJC7Q99615 494 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 MAP3K20Q9NYL2 800 aaKnown RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 LIMA1Q9UHB6 759 aaKnown RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 RPL26L1Q9UNX3 145 aaKnown RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 RABGAP1Q9Y3P9 1069 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 AFG3L2Q9Y4W6 797 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 RPTORQ8N122 1335 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 POTEFA5A3E0 1075 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 HTR3EA5X5Y0 456 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 TRIM43BA6NCK2 446 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 MEIS1O00470 390 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 CETN3O15182 167 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 PSMD10O75832 226 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 HNRNPCP07910 306 aaKnown RBP eCLIP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 PLA2G4BP0C869 781 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 POTEIP0CG38 1075 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 SPATA31C1P0DKV0 1188 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 MYBP10242 640 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 HSD17B3P37058 310 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 PPP1R2P41236 205 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 PMS1P54277 932 aaKnown RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 OCRLQ01968 901 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 VGLL4Q14135 290 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 COG2Q14746 738 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 UAP1Q16222 522 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 BCL2A1Q16548 175 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 THOC7Q6I9Y2 204 aaKnown RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 KLC3Q6P597 504 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 POTEGQ6S5H5 508 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 POTEEQ6S8J3 1075 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 GET4Q7L5D6 327 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 OTOP1Q7RTM1 612 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 KRT26Q7Z3Y9 468 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 SAPCD2Q86UD0 394 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 HOOK3Q86VS8 718 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 DEPTORQ8TB45 409 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 ATXN2LQ8WWM7 1075 aaKnown RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 HPS3Q969F9 1004 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 LRRC45Q96CN5 670 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 MAML3Q96JK9 1138 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 NR1H4Q96RI1 486 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 MXRA8Q9BRK3 442 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 NSRP1Q9H0G5 558 aaKnown RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 FAM114A2Q9NRY5 505 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 BMP2KQ9NSY1 1161 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 SUCLA2Q9P2R7 463 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-218ENST00000456174 RNF14Q9UBS8 474 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 SNCAIPQ9Y6H5 919 aa8.15□□□□□ -1.1
HDAC9-218ENST00000456174 P4HA2O15460 535 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 HEXIM1O94992 359 aaKnown RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 CYP1A1P04798 512 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 PDGFRBP09619 1106 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 SPATA31D3P0C874 917 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 ARP10275 920 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 GUCY2FP51841 1108 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 RPS6P62753 249 aaKnown RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 MRPS25P82663 173 aaKnown RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 GUCY2DQ02846 1103 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 SPAG1Q07617 926 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms