RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 RIBC1Q8N443 379 aaPredicted RBP13.02□□□□□ -0.32
NEDD4L-208ENST00000456173 ACCSQ96QU6 501 aa13.02□□□□□ -0.32
NEDD4L-208ENST00000456173 PDS5AQ29RF7 1337 aaKnown RBP13.02□□□□□ -0.32
NEDD4L-208ENST00000456173 ARHGEF37A1IGU5 675 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 SERPINB2P05120 415 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 AKR1B1P15121 316 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 SOX5P35711 763 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 CDO1Q16878 200 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 CLVS1Q8IUQ0 354 aaPredicted RBP13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 SENP7Q9BQF6 1050 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 SEMA4AQ9H3S1 761 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 BCS1LQ9Y276 419 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 COMMD3-BMI1R4GMX3 469 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 FAM58BPP0C7Q3 252 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 ATP6V1C1P21283 382 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 GCLCP48506 637 aaPredicted RBP13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 CTSWP56202 376 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 UBXN2AP68543 259 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 RSBN1Q5VWQ0 802 aaPredicted RBP13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 C16orf89Q6UX73 402 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 HORMAD1Q86X24 394 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 ITFG2Q969R8 447 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 ALKBH8Q96BT7 664 aaKnown RBP13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 LENG1Q96BZ8 264 aaPredicted RBP13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 C18orf8Q96DM3 657 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 ABHD8Q96I13 439 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 A1CFQ9NQ94 594 aaKnown RBP13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 PIH1D3Q9NQM4 214 aaKnown RBP13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 PNMA3Q9UL41 463 aa13.02□□□□□ -0.33
NEDD4L-208ENST00000456173 PRPSAP2O60256 369 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 SORBS3O60504 671 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 PDE8BO95263 885 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 TMEM191BP0C7N4 346 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 TCIRG1Q13488 830 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 INPP5AQ14642 412 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 CHI3L2Q15782 390 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 C1orf228Q6PIY5 440 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 USP17L2Q6R6M4 530 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 GDPD5Q8WTR4 605 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 RAD54LQ92698 747 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 KCND1Q9NSA2 647 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 PCMTD2Q9NV79 361 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 ERVK-7P63135 1459 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 NLRP1Q9C000 1473 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 DNMT1P26358 1616 aaKnown RBP13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 CALML6Q8TD86 181 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 GREM2Q9H772 168 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 SYBUQ9NX95 663 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 CHORDC1Q9UHD1 332 aaPredicted RBP13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 TSC22D2O75157 780 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 TRIM49P0CI25 452 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 TRIM49CP0CI26 452 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 GALK1P51570 392 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 MAPK7Q13164 816 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 ZNF554Q86TJ5 538 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 NUP93Q8N1F7 819 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 CABLES1Q8TDN4 633 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 E2F7Q96AV8 911 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 FAM111AQ96PZ2 611 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 MTA3Q9BTC8 594 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 TSPAN9O75954 239 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 SRGAP2CP0DJJ0 459 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 SRGAP2BP0DMP2 458 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 MAPK10P53779 464 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 CBX3Q13185 183 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 PTK7Q13308 1070 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 ITGB3BPQ13352 177 aaPredicted RBP13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 RASA2Q15283 850 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 DPP8Q6V1X1 898 aaPredicted RBP13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 TRIM9Q9C026 710 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 INTS2Q9H0H0 1204 aaKnown RBP13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 PLAGL2Q9UPG8 496 aa13.01□□□□□ -0.33
NEDD4L-208ENST00000456173 CFAP74Q9C0B2 1584 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 P4HA1P13674 534 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 NUDT2P50583 147 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 ERVK-9P63128 1117 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 POU5F1BQ06416 359 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 TRMT5Q32P41 509 aaKnown RBP13□□□□□ -0.33
NEDD4L-208ENST00000456173 PPP6R3Q5H9R7 873 aaPredicted RBP13□□□□□ -0.33
NEDD4L-208ENST00000456173 KRT39Q6A163 491 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 C3orf62Q6ZUJ4 267 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 PAWRQ96IZ0 340 aaKnown RBP13□□□□□ -0.33
NEDD4L-208ENST00000456173 BTBD10Q9BSF8 475 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 HESX1Q9UBX0 185 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 A0A1W2PQJ5 194 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 FKBP6O75344 327 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 ITGADQ13349 1161 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 EFHC1Q5JVL4 640 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 LAYNQ6UX15 382 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 MARK2Q7KZI7 788 aaKnown RBP13□□□□□ -0.33
NEDD4L-208ENST00000456173 RHOT1Q8IXI2 618 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 PPP1R14BQ96C90 147 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 ZC3H12CQ9C0D7 883 aaKnown RBP13□□□□□ -0.33
NEDD4L-208ENST00000456173 EME2A4GXA9 379 aaPredicted RBP13□□□□□ -0.33
NEDD4L-208ENST00000456173 KPNA4O00629 521 aaPredicted RBP13□□□□□ -0.33
NEDD4L-208ENST00000456173 P4HA2O15460 535 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 UCHL3P15374 230 aa13□□□□□ -0.33
NEDD4L-208ENST00000456173 EPHA10Q5JZY3 1008 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms