RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 NT5DC1Q5TFE4 455 aa14.23□□□□□ -0.13
TREX1-203ENST00000456089 C15orf39Q6ZRI6 1047 aa14.23□□□□□ -0.13
TREX1-203ENST00000456089 CEP57Q86XR8 500 aa14.23□□□□□ -0.13
TREX1-203ENST00000456089 RASSF8Q8NHQ8 419 aa14.23□□□□□ -0.13
TREX1-203ENST00000456089 SNX21Q969T3 373 aa14.23□□□□□ -0.13
TREX1-203ENST00000456089 IFT74Q96LB3 600 aa14.23□□□□□ -0.13
TREX1-203ENST00000456089 MYADMQ96S97 322 aa14.23□□□□□ -0.13
TREX1-203ENST00000456089 NT5C3AQ9H0P0 336 aa14.23□□□□□ -0.13
TREX1-203ENST00000456089 C2orf40Q9H1Z8 148 aa14.23□□□□□ -0.13
TREX1-203ENST00000456089 KCNK12Q9HB15 430 aa14.23□□□□□ -0.13
TREX1-203ENST00000456089 NOTCH4Q99466 2003 aa14.23□□□□□ -0.13
TREX1-203ENST00000456089 ACKR2O00590 384 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 ADAM12O43184 909 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 THP07101 528 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 NAMPTP43490 491 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 TDGQ13569 410 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 FAM171A1Q5VUB5 890 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 FLCNQ8NFG4 579 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 CMASQ8NFW8 434 aaPredicted RBP14.22□□□□□ -0.13
TREX1-203ENST00000456089 KIFAP3Q92845 792 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 ATOH1Q92858 354 aaPredicted RBP14.22□□□□□ -0.13
TREX1-203ENST00000456089 CALML4Q96GE6 196 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 MFSD1Q9H3U5 465 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 PIDD1Q9HB75 910 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 GOLGA2P5Q9HBQ8 144 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 WDR6Q9NNW5 1121 aaKnown RBP14.22□□□□□ -0.13
TREX1-203ENST00000456089 COL4A3Q01955 1670 aa14.22□□□□□ -0.13
TREX1-203ENST00000456089 DMDP11532 3685 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 SF3B1O75533 1304 aaKnown RBP eCLIP14.21□□□□□ -0.13
TREX1-203ENST00000456089 CCDC169A6NNP5 214 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 PI15O43692 258 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 UBA7P41226 1012 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 OSTNP61366 133 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.13
TREX1-203ENST00000456089 ATF7IP2Q5U623 682 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 CWF19L1Q69YN2 538 aaKnown RBP14.21□□□□□ -0.13
TREX1-203ENST00000456089 LILRA6Q6PI73 481 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 GET4Q7L5D6 327 aaPredicted RBP14.21□□□□□ -0.13
TREX1-203ENST00000456089 KCNK18Q7Z418 384 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 CEP120Q8N960 986 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 AK8Q96MA6 479 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 PRRX2Q99811 253 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 CLSTN3Q9BQT9 956 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 ADPGKQ9BRR6 497 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 RUSC1Q9BVN2 902 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 FNIP2Q9P278 1114 aa14.21□□□□□ -0.13
TREX1-203ENST00000456089 ZMYM2Q9UBW7 1377 aa14.21□□□□□ -0.14
TREX1-203ENST00000456089 ANK1P16157 1881 aa14.21□□□□□ -0.14
TREX1-203ENST00000456089 I3L4J1 428 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 GALR2O43603 387 aaPredicted RBP14.2□□□□□ -0.14
TREX1-203ENST00000456089 STX6O43752 255 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 HIP1RO75146 1068 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 CFHP08603 1231 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 PEX3P56589 373 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 NTHL1P78549 312 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 RAD51AP2Q09MP3 1159 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 PSMD5Q16401 504 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 ASTLQ6HA08 431 aaPredicted RBP14.2□□□□□ -0.14
TREX1-203ENST00000456089 DAW1Q8N136 415 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 SIX5Q8N196 739 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 KCTD17Q8N5Z5 321 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 LNX1Q8TBB1 728 aaPredicted RBP14.2□□□□□ -0.14
TREX1-203ENST00000456089 PLIN2Q99541 437 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 TTPALQ9BTX7 342 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 ZSCAN16Q9H4T2 348 aaPredicted RBP14.2□□□□□ -0.14
TREX1-203ENST00000456089 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.2□□□□□ -0.14
TREX1-203ENST00000456089 FBXL21Q9UKT6 434 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 DUSP12Q9UNI6 340 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 CACNA1HO95180 2353 aa14.2□□□□□ -0.14
TREX1-203ENST00000456089 SFI1A8K8P3 1242 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 CCL16O15467 120 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 SLC26A4O43511 780 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 PDIA4P13667 645 aaKnown RBP14.19□□□□□ -0.14
TREX1-203ENST00000456089 NPR3P17342 541 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 LONP1P36776 959 aaKnown RBP14.19□□□□□ -0.14
TREX1-203ENST00000456089 NPTX2P47972 431 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 CLCNKBP51801 687 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 ELMSAN1Q6PJG2 1045 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 TAS1R3Q7RTX0 852 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 TMEM130Q8N3G9 435 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 DRC1Q96MC2 740 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 MMTAG2Q9BU76 263 aaKnown RBP14.19□□□□□ -0.14
TREX1-203ENST00000456089 PRKD2Q9BZL6 878 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 PLEKHA4Q9H4M7 779 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 CA14Q9ULX7 337 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 MIA3Q5JRA6 1907 aa14.19□□□□□ -0.14
TREX1-203ENST00000456089 VPS13AQ96RL7 3174 aa14.18□□□□□ -0.14
TREX1-203ENST00000456089 K7ERI5 159 aa14.18□□□□□ -0.14
TREX1-203ENST00000456089 ZMYND10O75800 440 aa14.18□□□□□ -0.14
TREX1-203ENST00000456089 HARSP12081 509 aaKnown RBP14.18□□□□□ -0.14
TREX1-203ENST00000456089 BRCC3P46736 316 aa14.18□□□□□ -0.14
TREX1-203ENST00000456089 EFNA5P52803 228 aa14.18□□□□□ -0.14
TREX1-203ENST00000456089 CEBPZQ03701 1054 aaKnown RBP14.18□□□□□ -0.14
TREX1-203ENST00000456089 SOX4Q06945 474 aaPredicted RBP14.18□□□□□ -0.14
TREX1-203ENST00000456089 MAPK7Q13164 816 aa14.18□□□□□ -0.14
TREX1-203ENST00000456089 DMP1Q13316 513 aaPredicted RBP14.18□□□□□ -0.14
TREX1-203ENST00000456089 DCAF4L1Q3SXM0 396 aa14.18□□□□□ -0.14
TREX1-203ENST00000456089 CD300LGQ6UXG3 332 aa14.18□□□□□ -0.14
TREX1-203ENST00000456089 RSPO2Q6UXX9 243 aaPredicted RBP14.18□□□□□ -0.14
TREX1-203ENST00000456089 GRASPQ7Z6J2 395 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms