RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 CNTD1Q8N815 330 aa4.96□□□□□ -1.62
R3HDM1-212ENST00000456040 SLC46A2Q9BY10 475 aa4.96□□□□□ -1.62
R3HDM1-212ENST00000456040 TRPM5Q9NZQ8 1165 aa4.96□□□□□ -1.62
R3HDM1-212ENST00000456040 AHRRA9YTQ3 701 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 LEFTY2O00292 366 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 ENDOD1O94919 500 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 SNRPA1P09661 255 aaKnown RBP4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 OSMP13725 252 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 IL2RBP14784 551 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 LAG3P18627 525 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 PROZP22891 400 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 SREBF1P36956 1147 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 CLRN1P58418 232 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 NHLH2Q02577 135 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 PPP3CAQ08209 521 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 SP140Q13342 867 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 TIGD2Q4W5G0 525 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 GDF7Q7Z4P5 450 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 PQLC1Q8N2U9 271 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 REPS2Q8NFH8 660 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 SSH1Q8WYL5 1049 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 DMRT3Q9NQL9 472 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 MOCS1Q9NZB8 636 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 PCDHGA2Q9Y5H1 932 aa4.95□□□□□ -1.62
R3HDM1-212ENST00000456040 GAGE12BA1L429 117 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 GAGE12HA6NDE8 117 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 TRIM75PA6NK02 468 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 FAM171A2A8MVW0 826 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 CXorf49A8MYA2 514 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 RNASET2O00584 256 aaKnown RBP4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 ABHD16AO95870 558 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 SPATA31D3P0C874 917 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 ALOX15P16050 662 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 AGXTP21549 392 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 NR4A1P22736 598 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 RNASE9P60153 205 aaKnown RBP4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 CLUL1Q15846 466 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 RRP12Q5JTH9 1297 aaKnown RBP4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 ZNF362Q5T0B9 420 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 ATXN7L2Q5T6C5 722 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 LRRC55Q6ZSA7 311 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 SPATA31D4Q6ZUB0 917 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 RHOUQ7L0Q8 258 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 PLXDC1Q8IUK5 500 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 SYT12Q8IV01 421 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 RNF169Q8NCN4 708 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 SLC35B2Q8TB61 432 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 SENP6Q9GZR1 1112 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 ZNF768Q9H5H4 540 aaKnown RBP4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 ZNF277Q9NRM2 450 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 LANCL2Q9NS86 450 aa4.94□□□□□ -1.62
R3HDM1-212ENST00000456040 ATRNL1Q5VV63 1379 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 ZSCAN20P17040 1043 aaPredicted RBP4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 PTTG1IPP53801 180 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 MGAT2Q10469 447 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 AFMIDQ63HM1 303 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 PGM2L1Q6PCE3 622 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 KCNV1Q6PIU1 500 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 FBXO18Q8NFZ0 1043 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 PROKR1Q8TCW9 393 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 HOXB13Q92826 284 aaPredicted RBP4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 MYEOVQ96EZ4 313 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 CYFIP2Q96F07 1278 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 SLC2A13Q96QE2 648 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 CYP4F11Q9HBI6 524 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 TMEM140Q9NV12 185 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 DNM3Q9UQ16 869 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 CHST2Q9Y4C5 530 aa4.93□□□□□ -1.62
R3HDM1-212ENST00000456040 DRGXA6NNA5 263 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 TEX33O43247 280 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 B3GALT2O43825 422 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 HLA-DOAP06340 250 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 RAP2AP10114 183 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 ZNF37AP17032 561 aaPredicted RBP4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 ATP5JP18859 108 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 CDK11BP21127 795 aaKnown RBP4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 GUCY1A2P33402 732 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 GUCY2FP51841 1108 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 FAM189BP81408 668 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 INAVAQ3KP66 663 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 VRK3Q8IV63 474 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 DRC7Q8IY82 874 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 CASKIN2Q8WXE0 1202 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 STON2Q8WXE9 905 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 NELL1Q92832 810 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 MRI1Q9BV20 369 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 MLST8Q9BVC4 326 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 MANSC1Q9H8J5 431 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 AKIP1Q9NQ31 210 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 MKS1Q9NXB0 559 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 HS3ST4Q9Y661 456 aa4.92□□□□□ -1.62
R3HDM1-212ENST00000456040 INO80B-WBP1J3KQ70 363 aa4.91□□□□□ -1.62
R3HDM1-212ENST00000456040 ZNF185O15231 689 aa4.91□□□□□ -1.62
R3HDM1-212ENST00000456040 NCR1O76036 304 aa4.91□□□□□ -1.62
R3HDM1-212ENST00000456040 NDUFA10O95299 355 aa4.91□□□□□ -1.62
R3HDM1-212ENST00000456040 CHN2P52757 468 aa4.91□□□□□ -1.62
R3HDM1-212ENST00000456040 RAP2BP61225 183 aa4.91□□□□□ -1.62
R3HDM1-212ENST00000456040 MXRA7P84157 204 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms