RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 LRRC27Q9C0I9 530 aa18.98■□□□□ 0.63
USP39-208ENST00000455732 OLFML3Q9NRN5 406 aa18.98■□□□□ 0.63
USP39-208ENST00000455732 TOPORSQ9NS56 1045 aaPredicted RBP18.98■□□□□ 0.63
USP39-208ENST00000455732 FAM13BQ9NYF5 915 aa18.98■□□□□ 0.63
USP39-208ENST00000455732 GDAQ9Y2T3 454 aa18.98■□□□□ 0.63
USP39-208ENST00000455732 CLASP2O75122 1294 aaKnown RBP18.97■□□□□ 0.63
USP39-208ENST00000455732 PPP1R37O75864 691 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 THP07101 528 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 OR1G1P47890 313 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 TUSC3Q13454 348 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 NAB2Q15742 525 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 XKR4Q5GH76 650 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 ANKRD54Q6NXT1 300 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 CNNM4Q6P4Q7 775 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 ADHFE1Q8IWW8 467 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 RNF168Q8IYW5 571 aaPredicted RBP18.97■□□□□ 0.63
USP39-208ENST00000455732 DHX58Q96C10 678 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 HVCN1Q96D96 273 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 ZBTB45Q96K62 511 aaPredicted RBP18.97■□□□□ 0.63
USP39-208ENST00000455732 TCHPQ9BT92 498 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 STRA6Q9BX79 667 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 ANKFY1Q9P2R3 1169 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 PRG3Q9Y2Y8 225 aaPredicted RBP18.97■□□□□ 0.63
USP39-208ENST00000455732 HCFC2Q9Y5Z7 792 aa18.97■□□□□ 0.63
USP39-208ENST00000455732 MTCL1Q9Y4B5 1905 aaKnown RBP18.97■□□□□ 0.63
USP39-208ENST00000455732 PDCD11Q14690 1871 aaKnown RBP18.97■□□□□ 0.63
USP39-208ENST00000455732 TRIOO75962 3097 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.96■□□□□ 0.63
USP39-208ENST00000455732 HNRNPDLO14979 420 aaKnown RBP18.96■□□□□ 0.63
USP39-208ENST00000455732 CLDN3O15551 220 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 LILRB3O75022 631 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 NMT1P30419 496 aaKnown RBP18.96■□□□□ 0.63
USP39-208ENST00000455732 LIG4P49917 911 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 YARSP54577 528 aaKnown RBP18.96■□□□□ 0.63
USP39-208ENST00000455732 NUCB2P80303 420 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 AMPD3Q01432 767 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 PTPN14Q15678 1187 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 SYCE2Q6PIF2 218 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 ALKAL1Q6UXT8 129 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 ZNF720Q7Z2F6 126 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 ZBTB33Q86T24 672 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 BICD1Q96G01 975 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 SNX27Q96L92 541 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 SPATA32Q96LK8 384 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 ACAP3Q96P50 834 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 TRIM9Q9C026 710 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 SCAND2PQ9GZW5 306 aaPredicted RBP18.96■□□□□ 0.63
USP39-208ENST00000455732 S1PR5Q9H228 398 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 CXCL16Q9H2A7 254 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 EPHX3Q9H6B9 360 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 USP15Q9Y4E8 981 aaPredicted RBP18.96■□□□□ 0.63
USP39-208ENST00000455732 PLXNA3P51805 1871 aa18.96■□□□□ 0.63
USP39-208ENST00000455732 F8W810 466 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 POLR2DO15514 142 aaKnown RBP18.95■□□□□ 0.62
USP39-208ENST00000455732 SOD2P04179 222 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 SRGAP2BP0DMP2 458 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 SSTR3P32745 418 aaPredicted RBP18.95■□□□□ 0.62
USP39-208ENST00000455732 ALCAMQ13740 583 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 TMEM31Q5JXX7 168 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 ADALQ6DHV7 355 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 LLGL2Q6P1M3 1020 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 SUSD6Q92537 303 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 PPP1R10Q96QC0 940 aaKnown RBP18.95■□□□□ 0.62
USP39-208ENST00000455732 HERC2P3Q9BVR0 1158 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 COLEC11Q9BWP8 271 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 HAPLN2Q9GZV7 340 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 CNTN3Q9P232 1028 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 HCN4Q9Y3Q4 1203 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 VWA8A3KMH1 1905 aa18.95■□□□□ 0.62
USP39-208ENST00000455732 IDEP14735 1019 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 KCNE1P15382 129 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 HOXB8P17481 243 aaPredicted RBP18.94■□□□□ 0.62
USP39-208ENST00000455732 CMA1P23946 247 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 CA8P35219 290 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 PLA2G5P39877 138 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 KYAT1Q16773 422 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 ZC2HC1CQ53FD0 456 aaPredicted RBP18.94■□□□□ 0.62
USP39-208ENST00000455732 SLC39A4Q6P5W5 647 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 TAS1R1Q7RTX1 841 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 CASP10Q92851 521 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 CHAMP1Q96JM3 812 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 MRPL44Q9H9J2 332 aaKnown RBP18.94■□□□□ 0.62
USP39-208ENST00000455732 PANK4Q9NVE7 773 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 KCNH3Q9ULD8 1083 aa18.94■□□□□ 0.62
USP39-208ENST00000455732 C2orf16Q68DN1 1984 aa18.93■□□□□ 0.62
USP39-208ENST00000455732 A0A0B4J269 797 aa18.93■□□□□ 0.62
USP39-208ENST00000455732 FAM237AA0A1B0GTK4 181 aa18.93■□□□□ 0.62
USP39-208ENST00000455732 SMIM28A0A1B0GU29 152 aa18.93■□□□□ 0.62
USP39-208ENST00000455732 FAM189A1O60320 539 aa18.93■□□□□ 0.62
USP39-208ENST00000455732 HARSP12081 509 aaKnown RBP18.93■□□□□ 0.62
USP39-208ENST00000455732 OSTNP61366 133 aa18.93■□□□□ 0.62
USP39-208ENST00000455732 HSP90AA2PQ14568 343 aaPredicted RBP18.93■□□□□ 0.62
USP39-208ENST00000455732 HERC4Q5GLZ8 1057 aaPredicted RBP18.93■□□□□ 0.62
USP39-208ENST00000455732 CCDC65Q8IXS2 484 aa18.93■□□□□ 0.62
USP39-208ENST00000455732 GPR65Q8IYL9 337 aa18.93■□□□□ 0.62
USP39-208ENST00000455732 SLC22A17Q8WUG5 538 aa18.93■□□□□ 0.62
USP39-208ENST00000455732 FAM122AQ96E09 287 aa18.93■□□□□ 0.62
USP39-208ENST00000455732 UROC1Q96N76 676 aa18.93■□□□□ 0.62
USP39-208ENST00000455732 POP1Q99575 1024 aaKnown RBP18.93■□□□□ 0.62
USP39-208ENST00000455732 C7orf25Q9BPX7 421 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms