RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 LRRN2O75325 713 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 RECQL4O94761 1208 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 THP07101 528 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 PRKCQQ04759 706 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 UVSSAQ2YD98 709 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 PDXDC1Q6P996 788 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 MTSS1LQ765P7 747 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 ITFG1Q8TB96 612 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 C2orf40Q9H1Z8 148 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 TUFT1Q9NNX1 390 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 DMXL1Q9Y485 3027 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 CACNA1IQ9P0X4 2223 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 DNAH14Q0VDD8 3507 aa20.64■□□□□ 0.9
MSH6-206ENST00000455383 KANSL1LA0AUZ9 987 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 BTBD18B2RXH4 712 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 TMEM189-UBE2V1I3L0A0 370 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 CCL16O15467 120 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 FGFR3P22607 806 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.64■□□□□ 0.89
MSH6-206ENST00000455383 RTL10Q7L3V2 364 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 MAEAQ7L5Y9 396 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 CATSPER3Q86XQ3 398 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 CEP57Q86XR8 500 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 ZBTB8OSQ8IWT0 167 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 SUMF1Q8NBK3 374 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 BSNDQ8WZ55 320 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 OSBPL6Q9BZF3 934 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 CCDC113Q9H0I3 377 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 TMEM60Q9H2L4 133 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 DAXXQ9UER7 740 aaPredicted RBP20.64■□□□□ 0.89
MSH6-206ENST00000455383 VWA8A3KMH1 1905 aa20.64■□□□□ 0.89
MSH6-206ENST00000455383 NOTCH4Q99466 2003 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 ACKR2O00590 384 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 XYLBO75191 536 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 MED24O75448 989 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 EDN1P05305 212 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 SNW1Q13573 536 aaKnown RBP20.63■□□□□ 0.89
MSH6-206ENST00000455383 ANKRD1Q15327 319 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 MLF2Q15773 248 aaPredicted RBP20.63■□□□□ 0.89
MSH6-206ENST00000455383 ZNF528Q3MIS6 628 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 SLC44A4Q53GD3 710 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 RSPO2Q6UXX9 243 aaPredicted RBP20.63■□□□□ 0.89
MSH6-206ENST00000455383 DIS3L2Q8IYB7 885 aaKnown RBP20.63■□□□□ 0.89
MSH6-206ENST00000455383 KIAA2013Q8IYS2 634 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 RUBCNQ92622 972 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 BORCS6Q96GS4 357 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 MTRRQ9UBK8 725 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 KCNH3Q9ULD8 1083 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 COL4A3Q01955 1670 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 WDR87Q6ZQQ6 2873 aa20.63■□□□□ 0.89
MSH6-206ENST00000455383 ATP2B1P20020 1258 aa20.62■□□□□ 0.89
MSH6-206ENST00000455383 IGFBP6P24592 240 aaPredicted RBP20.62■□□□□ 0.89
MSH6-206ENST00000455383 RBM25P49756 843 aaKnown RBP20.62■□□□□ 0.89
MSH6-206ENST00000455383 PRPF4BQ13523 1007 aaKnown RBP20.62■□□□□ 0.89
MSH6-206ENST00000455383 MAPK6Q16659 721 aa20.62■□□□□ 0.89
MSH6-206ENST00000455383 AXDND1Q5T1B0 1012 aaPredicted RBP20.62■□□□□ 0.89
MSH6-206ENST00000455383 EEF1DP3Q658K8 133 aa20.62■□□□□ 0.89
MSH6-206ENST00000455383 CD300LGQ6UXG3 332 aa20.62■□□□□ 0.89
MSH6-206ENST00000455383 NOSTRINQ8IVI9 506 aa20.62■□□□□ 0.89
MSH6-206ENST00000455383 NPAS3Q8IXF0 933 aa20.62■□□□□ 0.89
MSH6-206ENST00000455383 SLC7A14Q8TBB6 771 aa20.62■□□□□ 0.89
MSH6-206ENST00000455383 GTF3C6Q969F1 213 aa20.62■□□□□ 0.89
MSH6-206ENST00000455383 NACC1Q96RE7 527 aa20.62■□□□□ 0.89
MSH6-206ENST00000455383 POLR3CQ9BUI4 534 aaPredicted RBP20.62■□□□□ 0.89
MSH6-206ENST00000455383 DNMT3BQ9UBC3 853 aaKnown RBP20.62■□□□□ 0.89
MSH6-206ENST00000455383 FBXO4Q9UKT5 387 aa20.62■□□□□ 0.89
MSH6-206ENST00000455383 MIA3Q5JRA6 1907 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 LARGE1O95461 756 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 PRKCBP05771 671 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 CYP11B2P19099 503 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 OR1D2P34982 312 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 NAMPTP43490 491 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 ANAPC15P60006 121 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 PFKPQ01813 784 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 ME3Q16798 604 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 NECAB1Q8N987 351 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 NSUN7Q8NE18 718 aaKnown RBP20.61■□□□□ 0.89
MSH6-206ENST00000455383 BCO2Q9BYV7 579 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 HCFC1R1Q9NWW0 138 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 DLL3Q9NYJ7 618 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 USP20Q9Y2K6 914 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 MTF2Q9Y483 593 aaPredicted RBP20.61■□□□□ 0.89
MSH6-206ENST00000455383 BACE2Q9Y5Z0 518 aa20.61■□□□□ 0.89
MSH6-206ENST00000455383 MED19A0JLT2 244 aaPredicted RBP20.6■□□□□ 0.89
MSH6-206ENST00000455383 MAGEA9P43362 315 aa20.6■□□□□ 0.89
MSH6-206ENST00000455383 PUM1Q14671 1186 aaKnown RBP eCLIP20.6■□□□□ 0.89
MSH6-206ENST00000455383 PADI6Q6TGC4 694 aa20.6■□□□□ 0.89
MSH6-206ENST00000455383 DGLUCYQ7Z3D6 616 aa20.6■□□□□ 0.89
MSH6-206ENST00000455383 DCLK2Q8N568 766 aa20.6■□□□□ 0.89
MSH6-206ENST00000455383 PPP1R10Q96QC0 940 aaKnown RBP20.6■□□□□ 0.89
MSH6-206ENST00000455383 ADPGKQ9BRR6 497 aa20.6■□□□□ 0.89
MSH6-206ENST00000455383 LTB4R2Q9NPC1 389 aa20.6■□□□□ 0.89
MSH6-206ENST00000455383 AVENQ9NQS1 362 aaPredicted RBP20.6■□□□□ 0.89
MSH6-206ENST00000455383 POLIQ9UNA4 740 aa20.6■□□□□ 0.89
MSH6-206ENST00000455383 PATJQ8NI35 1801 aa20.6■□□□□ 0.89
MSH6-206ENST00000455383 KINO60870 393 aaKnown RBP20.59■□□□□ 0.89
MSH6-206ENST00000455383 RPA1P27694 616 aa20.59■□□□□ 0.89
MSH6-206ENST00000455383 DCAF4L1Q3SXM0 396 aa20.59■□□□□ 0.89
MSH6-206ENST00000455383 PABPC1LQ4VXU2 614 aaKnown RBP20.59■□□□□ 0.89
MSH6-206ENST00000455383 CLDN23Q96B33 292 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms