RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 HCFC2Q9Y5Z7 792 aa27.21■■□□□ 1.95
MSH2-203ENST00000454849 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.2■■□□□ 1.94
MSH2-203ENST00000454849 SMIM28A0A1B0GU29 152 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 TISP43B9A030 160 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 HNRNPDLO14979 420 aaKnown RBP27.2■■□□□ 1.94
MSH2-203ENST00000454849 KIF4AO95239 1232 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 SOD2P04179 222 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 MYBP10242 640 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 KCNC3Q14003 757 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 ZBTB41Q5SVQ8 909 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 KANK3Q6NY19 840 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 FUT10Q6P4F1 479 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 ZPBP2Q6X784 338 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 ZMAT2Q96NC0 199 aaKnown RBP27.2■■□□□ 1.94
MSH2-203ENST00000454849 PPP1R10Q96QC0 940 aaKnown RBP27.2■■□□□ 1.94
MSH2-203ENST00000454849 HERC2P3Q9BVR0 1158 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 CDH22Q9UJ99 828 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 ADAM28Q9UKQ2 775 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 CFAP45Q9UL16 551 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 ZMYM2Q9UBW7 1377 aa27.2■■□□□ 1.94
MSH2-203ENST00000454849 TNFRSF10AO00220 468 aa27.19■■□□□ 1.94
MSH2-203ENST00000454849 CNPP09543 421 aaKnown RBP27.19■■□□□ 1.94
MSH2-203ENST00000454849 EPCAMP16422 314 aa27.19■■□□□ 1.94
MSH2-203ENST00000454849 SOX4Q06945 474 aaPredicted RBP27.19■■□□□ 1.94
MSH2-203ENST00000454849 SPAG1Q07617 926 aa27.19■■□□□ 1.94
MSH2-203ENST00000454849 MCL1Q07820 350 aa27.19■■□□□ 1.94
MSH2-203ENST00000454849 E2F4Q16254 413 aa27.19■■□□□ 1.94
MSH2-203ENST00000454849 PUS10Q3MIT2 529 aaKnown RBP27.19■■□□□ 1.94
MSH2-203ENST00000454849 KIAA1841Q6NSI8 718 aa27.19■■□□□ 1.94
MSH2-203ENST00000454849 SLC39A4Q6P5W5 647 aa27.19■■□□□ 1.94
MSH2-203ENST00000454849 ALKAL1Q6UXT8 129 aa27.19■■□□□ 1.94
MSH2-203ENST00000454849 C12orf76Q8N812 135 aaPredicted RBP27.19■■□□□ 1.94
MSH2-203ENST00000454849 C18orf25Q96B23 403 aaPredicted RBP27.19■■□□□ 1.94
MSH2-203ENST00000454849 SNX27Q96L92 541 aa27.19■■□□□ 1.94
MSH2-203ENST00000454849 KLHL5Q96PQ7 755 aa27.19■■□□□ 1.94
MSH2-203ENST00000454849 MRPL17Q9NRX2 175 aaKnown RBP27.19■■□□□ 1.94
MSH2-203ENST00000454849 RCOR1Q9UKL0 485 aa27.19■■□□□ 1.94
MSH2-203ENST00000454849 TRIP11Q15643 1979 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 NCOR1O75376 2440 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 ANKRD63C9JTQ0 380 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 LILRB3O75022 631 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 EFEMP2O95967 443 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 URODP06132 367 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 KLRC2P26717 231 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 TNFSF9P41273 254 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 COASYQ13057 564 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 SMAD4Q13485 552 aaKnown RBP27.18■■□□□ 1.94
MSH2-203ENST00000454849 BECN1Q14457 450 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 HERC4Q5GLZ8 1057 aaPredicted RBP27.18■■□□□ 1.94
MSH2-203ENST00000454849 ANKRD54Q6NXT1 300 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 SYCE2Q6PIF2 218 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 FGFBP2Q9BYJ0 223 aa27.18■■□□□ 1.94
MSH2-203ENST00000454849 MRPL44Q9H9J2 332 aaKnown RBP27.18■■□□□ 1.94
MSH2-203ENST00000454849 TOPORSQ9NS56 1045 aaPredicted RBP27.18■■□□□ 1.94
MSH2-203ENST00000454849 POLR2DO15514 142 aaKnown RBP27.17■■□□□ 1.94
MSH2-203ENST00000454849 CXCL8P10145 99 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 GLUD2P49448 558 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 CLCNKBP51801 687 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 GTF2BQ00403 316 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 KCNA1Q09470 495 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 SLC10A6Q3KNW5 377 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 KIAA0319Q5VV43 1072 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 ATL3Q6DD88 541 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 ZNF720Q7Z2F6 126 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 GLYCTKQ8IVS8 523 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 SMRP1Q8NCR6 262 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 FEZF2Q8TBJ5 459 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 HPS3Q969F9 1004 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 PANK4Q9NVE7 773 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 USP15Q9Y4E8 981 aaPredicted RBP27.17■■□□□ 1.94
MSH2-203ENST00000454849 IRAK3Q9Y616 596 aa27.17■■□□□ 1.94
MSH2-203ENST00000454849 WEE2P0C1S8 567 aa27.16■■□□□ 1.94
MSH2-203ENST00000454849 RPL17P18621 184 aaKnown RBP27.16■■□□□ 1.94
MSH2-203ENST00000454849 CASP1P29466 404 aa27.16■■□□□ 1.94
MSH2-203ENST00000454849 SSTR3P32745 418 aaPredicted RBP27.16■■□□□ 1.94
MSH2-203ENST00000454849 CEP57Q86XR8 500 aa27.16■■□□□ 1.94
MSH2-203ENST00000454849 RNF168Q8IYW5 571 aaPredicted RBP27.16■■□□□ 1.94
MSH2-203ENST00000454849 SLC22A17Q8WUG5 538 aa27.16■■□□□ 1.94
MSH2-203ENST00000454849 RIN2Q8WYP3 895 aaPredicted RBP27.16■■□□□ 1.94
MSH2-203ENST00000454849 EMILIN2Q9BXX0 1053 aa27.16■■□□□ 1.94
MSH2-203ENST00000454849 BDP1A6H8Y1 2624 aa27.16■■□□□ 1.94
MSH2-203ENST00000454849 I3L4J1 428 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 SRGAP2BP0DMP2 458 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 CASP5P51878 434 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 SMAD2Q15796 467 aaKnown RBP27.15■■□□□ 1.94
MSH2-203ENST00000454849 XKR4Q5GH76 650 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 FAM171A1Q5VUB5 890 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 RESP18Q5W5W9 173 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 PRSS55Q6UWB4 352 aaPredicted RBP27.15■■□□□ 1.94
MSH2-203ENST00000454849 TMEM184AQ6ZMB5 413 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 IQUBQ8NA54 791 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 LEO1Q8WVC0 666 aaPredicted RBP27.15■■□□□ 1.94
MSH2-203ENST00000454849 CASP10Q92851 521 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 MSTO1Q9BUK6 570 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 S1PR5Q9H228 398 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 FAM50BQ9Y247 325 aa27.15■■□□□ 1.94
MSH2-203ENST00000454849 C5orf42Q9H799 3197 aa27.14■■□□□ 1.94
MSH2-203ENST00000454849 TULP1O00294 542 aaPredicted RBP27.14■■□□□ 1.94
MSH2-203ENST00000454849 TEX28O15482 410 aa27.14■■□□□ 1.94
MSH2-203ENST00000454849 B3GAT3O94766 335 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms