RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CLCN3P51790 818 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 LBX1P52954 281 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 APBA1Q02410 837 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 ITGA7Q13683 1181 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 ZNF618Q5T7W0 954 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 TOGARAM2Q6ZUX3 1019 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 CCDC155Q8N6L0 562 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 CELF4Q9BZC1 486 aaKnown RBP5.42□□□□□ -1.54
RIF1-207ENST00000454583 CHST12Q9NRB3 414 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 HSPBP1Q9NZL4 362 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 CAPN11Q9UMQ6 739 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 LRP4O75096 1905 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 DNAH14Q0VDD8 3507 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 EML5Q05BV3 1969 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 A0A0U1RQG5 324 aaPredicted RBP5.42□□□□□ -1.54
RIF1-207ENST00000454583 M0QZQ0 153 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 DYNC1I1O14576 645 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 KIAA0391O15091 583 aaKnown RBP5.42□□□□□ -1.54
RIF1-207ENST00000454583 EXTL3O43909 919 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 FGFR1P11362 822 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 AXLP30530 894 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 KIF22Q14807 665 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 RNF43Q68DV7 783 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 DYMQ7RTS9 669 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 DPP9Q86TI2 863 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 NOC3LQ8WTT2 800 aaKnown RBP5.42□□□□□ -1.54
RIF1-207ENST00000454583 SYN2Q92777 582 aaPredicted RBP5.42□□□□□ -1.54
RIF1-207ENST00000454583 CCDC51Q96ER9 411 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 LRRC27Q9C0I9 530 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 MARCH5Q9NX47 278 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 CTNND2Q9UQB3 1225 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 NFE2L3Q9Y4A8 694 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 TP53BP1Q12888 1972 aaPredicted RBP5.42□□□□□ -1.54
RIF1-207ENST00000454583 A0A087WZ62 844 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 SPTLC1O15269 473 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 CYP11A1P05108 521 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 IKQ13123 557 aaPredicted RBP5.42□□□□□ -1.54
RIF1-207ENST00000454583 MFSD14CQ5VZR4 134 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 SPECC1LQ69YQ0 1117 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 CXCL17Q6UXB2 119 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 CYP4V2Q6ZWL3 525 aaPredicted RBP5.42□□□□□ -1.54
RIF1-207ENST00000454583 EXOC8Q8IYI6 725 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 MYOCDQ8IZQ8 938 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 LRRC71Q8N4P6 559 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 WDTC1Q8N5D0 677 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 U2AF1L4Q8WU68 220 aaKnown RBP5.42□□□□□ -1.54
RIF1-207ENST00000454583 FDXACB1Q9BRP7 624 aaPredicted RBP5.42□□□□□ -1.54
RIF1-207ENST00000454583 KATNAL1Q9BW62 490 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 GDAP2Q9NXN4 497 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 IL37Q9NZH6 218 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 NEU3Q9UQ49 428 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 BOLA1Q9Y3E2 137 aa5.42□□□□□ -1.54
RIF1-207ENST00000454583 C17orf102A2RUQ5 167 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 BTNL10A8MVZ5 291 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 HHLA1C9JL84 531 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 C5orf67F2Z3F1 127 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 SLC16A4O15374 487 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 PJA2O43164 708 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 DYNC1LI2O43237 492 aaPredicted RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 EVI5O60447 810 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 ARHGEF15O94989 841 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 FAM163BP0C2L3 166 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 CTCFP49711 727 aaPredicted RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 COPB1P53618 953 aaKnown RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 BFSP1Q12934 665 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 PRPF4BQ13523 1007 aaKnown RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 VWA3BQ502W6 1294 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 PAQR9Q6ZVX9 377 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 CBWD2Q8IUF1 395 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 BEST2Q8NFU1 509 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 PPP1R13LQ8WUF5 828 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 DPF3Q92784 378 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 KHSRPQ92945 711 aaKnown RBP eCLIP5.41□□□□□ -1.542e-8■□□□□ 10.5
RIF1-207ENST00000454583 CEP170P1Q96L14 293 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 ABHD10Q9NUJ1 306 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 SUCLA2Q9P2R7 463 aaPredicted RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 SEPT9Q9UHD8 586 aaPredicted RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 MYO6Q9UM54 1294 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 ADGRG1Q9Y653 693 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 SPENQ96T58 3664 aaKnown RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 MYH10P35580 1976 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 DKC1O60832 514 aaKnown RBP eCLIP5.41□□□□□ -1.54
RIF1-207ENST00000454583 TOM1L1O75674 476 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 CST3P01034 146 aaPredicted RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 VTNP04004 478 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 RPLP2P05387 115 aaKnown RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 TAF2Q6P1X5 1199 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 MPZL3Q6UWV2 235 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 OTUD6AQ7L8S5 288 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 CEP120Q8N960 986 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 C1orf127Q8N9H9 656 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 OR5B17Q8NGF7 314 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 CAGE1Q8TC20 777 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 TCP11Q8WWU5 503 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 CLP1Q92989 425 aaKnown RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 JAKMIP2Q96AA8 810 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 NAT10Q9H0A0 1025 aaKnown RBP5.41□□□□□ -1.54
RIF1-207ENST00000454583 TRPV6Q9H1D0 765 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 TMEM206Q9H813 350 aa5.41□□□□□ -1.54
RIF1-207ENST00000454583 TMEM30AQ9NV96 361 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms