RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CHSY3Q70JA7 882 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 KBTBD6Q86V97 674 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 CERS3Q8IU89 383 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 RPAP2Q8IXW5 612 aaPredicted RBP6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 NEDD1Q8NHV4 660 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 GLG1Q92896 1179 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 MKL1Q969V6 931 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 OSMRQ99650 979 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 IER2Q9BTL4 223 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 PCGF6Q9BYE7 350 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 SEMA4CQ9C0C4 833 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 MUC3BQ9H195 1237 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 TMX1Q9H3N1 280 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 COPRSQ9NQ92 184 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 C2orf42Q9NWW7 574 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 DDX41Q9UJV9 622 aaKnown RBP6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 LOXHD1Q8IVV2 1947 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 KNTC1P50748 2209 aa6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 GOLGA4Q13439 2230 aaKnown RBP6.22□□□□□ -1.41
SBDSP1-204ENST00000453858 ANKHD1Q8IWZ3 2542 aaKnown RBP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 A0A1W2PP55 124 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 UPK3BL1B0FP48 263 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 UPK3BL2E5RIL1 263 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 PDE2AO00408 941 aaPredicted RBP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 CAPN9O14815 690 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 GADD45BO75293 160 aaPredicted RBP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 SMIM10L2AP0DMW4 78 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 SMIM10L2BP0DMW5 78 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 SCG2P13521 617 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 ITPKBP27987 946 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 SIM1P81133 766 aaPredicted RBP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 TFCP2Q12800 502 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 PPP2R5DQ14738 602 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 PEAR1Q5VY43 1037 aaPredicted RBP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 KCNT2Q6UVM3 1135 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 CYP26C1Q6V0L0 522 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 NSMFQ6X4W1 530 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 ZNF852Q6ZMS4 543 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 C1orf229Q6ZS94 237 aaPredicted RBP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 CHST3Q7LGC8 479 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 WDR5BQ86VZ2 330 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 GIPC2Q8TF65 315 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 ZNF707Q96C28 371 aaPredicted RBP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 LPIN3Q9BQK8 851 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 BHLHE41Q9C0J9 482 aaPredicted RBP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 SMG9Q9H0W8 520 aaKnown RBP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 NPHS2Q9NP85 383 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 MCM9Q9NXL9 1143 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 NYAP2Q9P242 653 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 CTDP1Q9Y5B0 961 aaPredicted RBP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 SUPT16HQ9Y5B9 1047 aaKnown RBP6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 ICE1Q9Y2F5 2266 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 DOCK6Q96HP0 2047 aa6.21□□□□□ -1.42
SBDSP1-204ENST00000453858 TBKBP1A7MCY6 615 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 NFIBO00712 420 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 ZNF16P17020 682 aaPredicted RBP6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 LAG3P18627 525 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 CD52P31358 61 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 PBX3P40426 434 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 CLCN4P51793 760 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 FAM189BP81408 668 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 DAB2P98082 770 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 KRT17Q04695 432 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 SPOUT1Q5T280 376 aaKnown RBP6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 CEP135Q66GS9 1140 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 TSHZ1Q6ZSZ6 1077 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 CEP68Q76N32 757 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 CACNA2D4Q7Z3S7 1137 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 TMC8Q8IU68 726 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 CCNJLQ8IV13 435 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 EPS8L3Q8TE67 593 aaKnown RBP6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 CLEC4DQ8WXI8 215 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 AUTS2Q8WXX7 1259 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 PSMG3-AS1Q96PY0 264 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 DUSP9Q99956 384 aaKnown RBP6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 FTHL17Q9BXU8 183 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 DCP1AQ9NPI6 582 aaPredicted RBP6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 TMEM9BQ9NQ34 198 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 SETD4Q9NVD3 440 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 SPG21Q9NZD8 308 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 AKAP2Q9Y2D5 859 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 STARD13Q9Y3M8 1113 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 AK5Q9Y6K8 562 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 MYH15Q9Y2K3 1946 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 CLUHO75153 1309 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 LAMA4Q16363 1823 aa6.2□□□□□ -1.42
SBDSP1-204ENST00000453858 IGKV6D-41A0A0C4DH26 115 aa6.19□□□□□ -1.42
SBDSP1-204ENST00000453858 CCDC195A0A1B0GUA6 201 aa6.19□□□□□ -1.42
SBDSP1-204ENST00000453858 SPDYE3A6NKU9 549 aa6.19□□□□□ -1.42
SBDSP1-204ENST00000453858 SHISA8B8ZZ34 492 aa6.19□□□□□ -1.42
SBDSP1-204ENST00000453858 M0R082 166 aa6.19□□□□□ -1.42
SBDSP1-204ENST00000453858 MEFVO15553 781 aaPredicted RBP6.19□□□□□ -1.42
SBDSP1-204ENST00000453858 PLA2G6O60733 806 aa6.19□□□□□ -1.42
SBDSP1-204ENST00000453858 UQCRFS1P1P0C7P4 283 aa6.19□□□□□ -1.42
SBDSP1-204ENST00000453858 CHRNB1P11230 501 aa6.19□□□□□ -1.42
SBDSP1-204ENST00000453858 SARSP49591 514 aaKnown RBP6.19□□□□□ -1.42
SBDSP1-204ENST00000453858 SNAP25P60880 206 aa6.19□□□□□ -1.42
SBDSP1-204ENST00000453858 PFKPQ01813 784 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms