RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PCDHB12Q9Y5F1 795 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 TTC3P53804 2025 aa17.12■□□□□ 0.33
VCX3B-204ENST00000453306 A0A0U1RQF3 1178 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 FSD2A1L4K1 749 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 ZNF623O75123 536 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 TOM1L1O75674 476 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 CSPG5O95196 566 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 GATMP50440 423 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 AFF1P51825 1210 aaKnown RBP17.11■□□□□ 0.33
VCX3B-204ENST00000453306 MCL1Q07820 350 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 ADAM15Q13444 863 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 CLUL1Q15846 466 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 DPCR1Q3MIW9 517 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 SPOUT1Q5T280 376 aaKnown RBP17.11■□□□□ 0.33
VCX3B-204ENST00000453306 TWF2Q6IBS0 349 aaKnown RBP17.11■□□□□ 0.33
VCX3B-204ENST00000453306 NOTUMQ6P988 496 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 KLHL23Q8NBE8 558 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 SPPL3Q8TCT6 385 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 LPPQ93052 612 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 NXF3Q9H4D5 531 aaKnown RBP17.11■□□□□ 0.33
VCX3B-204ENST00000453306 FAM105AQ9NUU6 356 aa17.11■□□□□ 0.33
VCX3B-204ENST00000453306 MUC6Q6W4X9 2439 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 N4BP3O15049 544 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 CLIC2O15247 247 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 ITGB1P05556 798 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 ZSCAN20P17040 1043 aaPredicted RBP17.1■□□□□ 0.33
VCX3B-204ENST00000453306 PTMSP20962 102 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 SCP2P22307 547 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 LIG4P49917 911 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 NLRP12P59046 1061 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 UBE3AQ05086 875 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 DLX2Q07687 328 aaPredicted RBP17.1■□□□□ 0.33
VCX3B-204ENST00000453306 CENPPQ6IPU0 288 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 SLC27A1Q6PCB7 646 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 MPZL3Q6UWV2 235 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 CRELD2Q6UXH1 353 aaPredicted RBP17.1■□□□□ 0.33
VCX3B-204ENST00000453306 AGMOQ6ZNB7 445 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 SLC24A5Q71RS6 500 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 TRIML1Q8N9V2 468 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 POF1BQ8WVV4 589 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 CCDC47Q96A33 483 aaKnown RBP17.1■□□□□ 0.33
VCX3B-204ENST00000453306 CCDC51Q96ER9 411 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 BICD1Q96G01 975 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 FUCA2Q9BTY2 467 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 KCNH6Q9H252 994 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 PCIF1Q9H4Z3 704 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 AGPAT3Q9NRZ7 376 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 IPPQ9Y573 584 aa17.1■□□□□ 0.33
VCX3B-204ENST00000453306 HNRNPDLO14979 420 aaKnown RBP17.09■□□□□ 0.33
VCX3B-204ENST00000453306 TBX10O75333 385 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 HARSP12081 509 aaKnown RBP17.09■□□□□ 0.33
VCX3B-204ENST00000453306 IBSPP21815 317 aaPredicted RBP17.09■□□□□ 0.33
VCX3B-204ENST00000453306 GTF2F1P35269 517 aaKnown RBP eCLIP17.09■□□□□ 0.33
VCX3B-204ENST00000453306 IRS1P35568 1242 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 TNFSF9P41273 254 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 WNT7BP56706 349 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 CAMK1Q14012 370 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 SKOR2Q2VWA4 1001 aaPredicted RBP17.09■□□□□ 0.33
VCX3B-204ENST00000453306 ANKRD40Q6AI12 368 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 SYCP3Q8IZU3 236 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 EFHBQ8N7U6 833 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 GBP3Q9H0R5 595 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 TMEM206Q9H813 350 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 DMAC2Q9NW81 257 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 ANKFY1Q9P2R3 1169 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 UBE4BO95155 1302 aa17.09■□□□□ 0.33
VCX3B-204ENST00000453306 TRIM49BA6NDI0 452 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 CLDN3O15551 220 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 MCF2P10911 925 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 FGFR1P11362 822 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 AKAP5P24588 427 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 DNAJB1P25685 340 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 NCBP1Q09161 790 aaKnown RBP17.08■□□□□ 0.32
VCX3B-204ENST00000453306 ZNF568Q3ZCX4 644 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 CLLU1OSQ5K130 101 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 PDE12Q6L8Q7 609 aaKnown RBP17.08■□□□□ 0.32
VCX3B-204ENST00000453306 THNSL1Q8IYQ7 743 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 TMEM130Q8N3G9 435 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 GSTCDQ8NEC7 633 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 MICAL1Q8TDZ2 1067 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 DUSP9Q99956 384 aaKnown RBP17.08■□□□□ 0.32
VCX3B-204ENST00000453306 TCHPQ9BT92 498 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 MIOSQ9NXC5 875 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 SNTG2Q9NY99 539 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 TRAF3IP3Q9Y228 551 aa17.08■□□□□ 0.32
VCX3B-204ENST00000453306 GOLGA8IPA6NC78 632 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 GOLGA8JA6NMD2 632 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 TBKBP1A7MCY6 615 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 PDXKO00764 312 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 LINC01565O15544 149 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 ABCD1P33897 745 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 NRIP1P48552 1158 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 STX17P56962 302 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 OSTNP61366 133 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 ZSCAN23Q3MJ62 389 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 KLHL10Q6JEL2 608 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 TTI2Q6NXR4 508 aa17.07■□□□□ 0.32
VCX3B-204ENST00000453306 C11orf57Q6ZUT1 292 aaPredicted RBP17.07■□□□□ 0.32
VCX3B-204ENST00000453306 STXBP4Q6ZWJ1 553 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms