RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CACNG4Q9UBN1 327 aa12.91□□□□□ -0.34
HERC3-207ENST00000452979 FBXO4Q9UKT5 387 aa12.91□□□□□ -0.34
HERC3-207ENST00000452979 TPCN1Q9ULQ1 816 aa12.91□□□□□ -0.34
HERC3-207ENST00000452979 KIF4AO95239 1232 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 THP07101 528 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 C8AP07357 584 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 SPATA31C1P0DKV0 1188 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 NTHL1P78549 312 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 ELAVL2Q12926 359 aaKnown RBP12.9□□□□□ -0.34
HERC3-207ENST00000452979 SNW1Q13573 536 aaKnown RBP12.9□□□□□ -0.34
HERC3-207ENST00000452979 RAB33AQ14088 237 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 PUM1Q14671 1186 aaKnown RBP eCLIP12.9□□□□□ -0.34
HERC3-207ENST00000452979 PSMD5Q16401 504 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 CALCRLQ16602 461 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 SLC44A4Q53GD3 710 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 LIN9Q5TKA1 542 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 ST13P5Q8NFI4 369 aaPredicted RBP12.9□□□□□ -0.34
HERC3-207ENST00000452979 CXCL16Q9H2A7 254 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 DLL3Q9NYJ7 618 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 CACNA1IQ9P0X4 2223 aa12.9□□□□□ -0.34
HERC3-207ENST00000452979 COL4A3Q01955 1670 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 A0A087WWV3 80 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 CASTOR2A6NHX0 329 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 LRRIQ4A6NIV6 560 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 TTLL13PA6NNM8 815 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 N4BP3O15049 544 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 ADAM12O43184 909 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 XYLBO75191 536 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 LRRN2O75325 713 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 FGFR3P22607 806 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 TXKP42681 527 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 MAGEA9P43362 315 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 PFKPQ01813 784 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 MLF2Q15773 248 aaPredicted RBP12.89□□□□□ -0.35
HERC3-207ENST00000452979 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
HERC3-207ENST00000452979 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.89□□□□□ -0.35
HERC3-207ENST00000452979 DGLUCYQ7Z3D6 616 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 CEP57Q86XR8 500 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 MCPH1Q8NEM0 835 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 ITFG1Q8TB96 612 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 CCDC43Q96MW1 224 aaKnown RBP12.89□□□□□ -0.35
HERC3-207ENST00000452979 BCO2Q9BYV7 579 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 PDZD7Q9H5P4 517 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
HERC3-207ENST00000452979 GPRC5CQ9NQ84 441 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 SNTG2Q9NY99 539 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 ORC3Q9UBD5 711 aaPredicted RBP12.89□□□□□ -0.35
HERC3-207ENST00000452979 KCNH3Q9ULD8 1083 aa12.89□□□□□ -0.35
HERC3-207ENST00000452979 EP300Q09472 2414 aaPredicted RBP12.88□□□□□ -0.35
HERC3-207ENST00000452979 MED19A0JLT2 244 aaPredicted RBP12.88□□□□□ -0.35
HERC3-207ENST00000452979 TMEM189-UBE2V1I3L0A0 370 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 ACKR2O00590 384 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 CCL16O15467 120 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 NEMFO60524 1076 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 DTNBO60941 627 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 ANAPC15P60006 121 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 PRPF4BQ13523 1007 aaKnown RBP12.88□□□□□ -0.35
HERC3-207ENST00000452979 CATSPER3Q86XQ3 398 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 ZBTB8OSQ8IWT0 167 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 DCLK2Q8N568 766 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 HASPINQ8TF76 798 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 NELL1Q92832 810 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 CLDN23Q96B33 292 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 NELL2Q99435 816 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 CCDC113Q9H0I3 377 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 C2orf40Q9H1Z8 148 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 BRMS1Q9HCU9 246 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 TUFT1Q9NNX1 390 aa12.88□□□□□ -0.35
HERC3-207ENST00000452979 DNMT3BQ9UBC3 853 aaKnown RBP12.88□□□□□ -0.35
HERC3-207ENST00000452979 MTF2Q9Y483 593 aaPredicted RBP12.88□□□□□ -0.35
HERC3-207ENST00000452979 TRIP11Q15643 1979 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 OTOGLQ3ZCN5 2332 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 FAM170BA6NMN3 283 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 BTBD18B2RXH4 712 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 WNT7AO00755 349 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 SPTLC1O15269 473 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 USO1O60763 962 aaKnown RBP12.87□□□□□ -0.35
HERC3-207ENST00000452979 KINO60870 393 aaKnown RBP12.87□□□□□ -0.35
HERC3-207ENST00000452979 ECI2O75521 394 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 RECQL4O94761 1208 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 ATP2B1P20020 1258 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 OR1D2P34982 312 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 MAPK6Q16659 721 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 CD300LGQ6UXG3 332 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 MAEAQ7L5Y9 396 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 NOSTRINQ8IVI9 506 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 NPAS3Q8IXF0 933 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 ZBTB44Q8NCP5 570 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 SLC7A14Q8TBB6 771 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 NACC1Q96RE7 527 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 POLR3CQ9BUI4 534 aaPredicted RBP12.87□□□□□ -0.35
HERC3-207ENST00000452979 AVENQ9NQS1 362 aaPredicted RBP12.87□□□□□ -0.35
HERC3-207ENST00000452979 SPATA6Q9NWH7 488 aaPredicted RBP12.87□□□□□ -0.35
HERC3-207ENST00000452979 HCFC1R1Q9NWW0 138 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 MTRRQ9UBK8 725 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 PCDHGA2Q9Y5H1 932 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 BACE2Q9Y5Z0 518 aa12.87□□□□□ -0.35
HERC3-207ENST00000452979 LAMTOR5O43504 91 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 LILRB5O75023 590 aa12.86□□□□□ -0.35
HERC3-207ENST00000452979 MED24O75448 989 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms