RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 CCDC94Q9BW85 323 aaPredicted RBP21.81■■□□□ 1.08
COL9A3-202ENST00000452372 BLZF1Q9H2G9 400 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 CLEC1BQ9P126 229 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 ANKFY1Q9P2R3 1169 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 DNAJB4Q9UDY4 337 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 TRIP11Q15643 1979 aa21.81■■□□□ 1.08
COL9A3-202ENST00000452372 PVALEFA0A1B0GWK0 134 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 MBTPS2O43462 519 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 B4GALT3O60512 393 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 GCNT3O95395 438 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 ALDH2P05091 517 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 CASP1P29466 404 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 ERVFC1P60507 584 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 DSC1Q08554 894 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 GRIK3Q13003 919 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 NOLC1Q14978 699 aaKnown RBP eCLIP21.8■■□□□ 1.08
COL9A3-202ENST00000452372 SMAD2Q15796 467 aaKnown RBP21.8■■□□□ 1.08
COL9A3-202ENST00000452372 TMEM31Q5JXX7 168 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 COLGALT2Q8IYK4 626 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 GRAMD1CQ8IYS0 662 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 HAPLN2Q9GZV7 340 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 PRKAG3Q9UGI9 489 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 LZTS1Q9Y250 596 aa21.8■■□□□ 1.08
COL9A3-202ENST00000452372 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-202ENST00000452372 FAM86C2PA6NEL3 165 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 NT5C1B-RDH14C9J2C7 533 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 ZNF202O95125 648 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 MYL1P05976 194 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 MYBP10242 640 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 SSTR3P32745 418 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-202ENST00000452372 MATR3P43243 847 aaKnown RBP eCLIP21.79■■□□□ 1.08
COL9A3-202ENST00000452372 SLC11A1P49279 550 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 CASP5P51878 434 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 YARSP54577 528 aaKnown RBP21.79■■□□□ 1.08
COL9A3-202ENST00000452372 OSTNP61366 133 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 KRT17Q04695 432 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 EHHADHQ08426 723 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 L1TD1Q5T7N2 865 aaKnown RBP21.79■■□□□ 1.08
COL9A3-202ENST00000452372 SLC39A4Q6P5W5 647 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 ADHFE1Q8IWW8 467 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 EFHBQ8N7U6 833 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 ACAP3Q96P50 834 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 ACCSQ96QU6 501 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 FGFBP2Q9BYJ0 223 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 PUF60Q9UHX1 559 aaKnown RBP21.79■■□□□ 1.08
COL9A3-202ENST00000452372 EXOC7Q9UPT5 735 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 CITO14578 2027 aa21.79■■□□□ 1.08
COL9A3-202ENST00000452372 ANKRD63C9JTQ0 380 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 PTGESO14684 152 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 GLP2RO95838 553 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 HARSP12081 509 aaKnown RBP21.78■■□□□ 1.08
COL9A3-202ENST00000452372 NRIP1P48552 1158 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 KCNA1Q09470 495 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 XKR4Q5GH76 650 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 ALKAL1Q6UXT8 129 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 KRBA2Q6ZNG9 492 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 RBM23Q86U06 439 aaKnown RBP21.78■■□□□ 1.08
COL9A3-202ENST00000452372 HPS3Q969F9 1004 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 TMEM169Q96HH4 297 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 CXCL16Q9H2A7 254 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 TSHZ2Q9NRE2 1034 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 TOPORSQ9NS56 1045 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-202ENST00000452372 FAN1Q9Y2M0 1017 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 STYXL1Q9Y6J8 313 aa21.78■■□□□ 1.08
COL9A3-202ENST00000452372 A0A0B4J269 797 aa21.77■■□□□ 1.08
COL9A3-202ENST00000452372 NRP1O14786 923 aa21.77■■□□□ 1.08
COL9A3-202ENST00000452372 FSCN2O14926 492 aa21.77■■□□□ 1.08
COL9A3-202ENST00000452372 THP07101 528 aa21.77■■□□□ 1.08
COL9A3-202ENST00000452372 KYAT1Q16773 422 aa21.77■■□□□ 1.08
COL9A3-202ENST00000452372 FAM26FQ5R3K3 315 aa21.77■■□□□ 1.08
COL9A3-202ENST00000452372 SLFN12LQ6IEE8 588 aa21.77■■□□□ 1.08
COL9A3-202ENST00000452372 STXBP4Q6ZWJ1 553 aa21.77■■□□□ 1.08
COL9A3-202ENST00000452372 TMEM173Q86WV6 379 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-202ENST00000452372 FMR1NBQ8N0W7 255 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-202ENST00000452372 IGSF21Q96ID5 467 aa21.77■■□□□ 1.08
COL9A3-202ENST00000452372 IPO9Q96P70 1041 aaKnown RBP21.77■■□□□ 1.08
COL9A3-202ENST00000452372 CD207Q9UJ71 328 aa21.77■■□□□ 1.08
COL9A3-202ENST00000452372 FAM50BQ9Y247 325 aa21.77■■□□□ 1.08
COL9A3-202ENST00000452372 OGTO15294 1046 aa21.76■■□□□ 1.07
COL9A3-202ENST00000452372 KLRC4O43908 158 aa21.76■■□□□ 1.07
COL9A3-202ENST00000452372 NR1I2O75469 434 aa21.76■■□□□ 1.07
COL9A3-202ENST00000452372 PRPF6O94906 941 aaKnown RBP21.76■■□□□ 1.07
COL9A3-202ENST00000452372 CLTAP09496 248 aa21.76■■□□□ 1.07
COL9A3-202ENST00000452372 SMAD4Q13485 552 aaKnown RBP21.76■■□□□ 1.07
COL9A3-202ENST00000452372 NAB2Q15742 525 aa21.76■■□□□ 1.07
COL9A3-202ENST00000452372 SEZ6Q53EL9 994 aa21.76■■□□□ 1.07
COL9A3-202ENST00000452372 GLIS3Q8NEA6 775 aa21.76■■□□□ 1.07
COL9A3-202ENST00000452372 ENGASEQ8NFI3 743 aa21.76■■□□□ 1.07
COL9A3-202ENST00000452372 IKZF4Q9H2S9 585 aa21.76■■□□□ 1.07
COL9A3-202ENST00000452372 TMEM206Q9H813 350 aa21.76■■□□□ 1.07
COL9A3-202ENST00000452372 TLR9Q9NR96 1032 aa21.76■■□□□ 1.07
COL9A3-202ENST00000452372 SMIM28A0A1B0GU29 152 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 PER2O15055 1255 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 EIF3DO15371 548 aaKnown RBP eCLIP21.75■■□□□ 1.07
COL9A3-202ENST00000452372 FAM189A1O60320 539 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 OR1G1P47890 313 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 RBM10P98175 930 aaKnown RBP21.75■■□□□ 1.07
COL9A3-202ENST00000452372 TUSC3Q13454 348 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 SNW1Q13573 536 aaKnown RBP21.75■■□□□ 1.07
COL9A3-202ENST00000452372 POSTNQ15063 836 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms