RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ALKBH5Q6P6C2 394 aaKnown RBP11.59□□□□□ -0.55
PKP4-206ENST00000452162 TRMT1LQ7Z2T5 733 aaKnown RBP11.59□□□□□ -0.55
PKP4-206ENST00000452162 MAP4K3Q8IVH8 894 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 CCDC60Q8IWA6 550 aaPredicted RBP11.59□□□□□ -0.55
PKP4-206ENST00000452162 PLEKHO2Q8TD55 490 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 SPIRE2Q8WWL2 714 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 KIFAP3Q92845 792 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 PCYT2Q99447 389 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 ABCB6Q9NP58 842 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 TBX20Q9UMR3 447 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 EMSYQ7Z589 1322 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 H3BRB1 525 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 HAS3O00219 553 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 P4HA2O15460 535 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 N4BP1O75113 896 aaKnown RBP11.59□□□□□ -0.55
PKP4-206ENST00000452162 RFX1P22670 979 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 NAP1L1P55209 391 aaKnown RBP11.59□□□□□ -0.55
PKP4-206ENST00000452162 PPP3CAQ08209 521 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 C2orf54Q08AI8 447 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 DMP1Q13316 513 aaPredicted RBP11.59□□□□□ -0.55
PKP4-206ENST00000452162 MFSD10Q14728 455 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 EPC2Q52LR7 807 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 MEI1Q5TIA1 1274 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 PHLDB3Q6NSJ2 640 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 SWSAP1Q6NVH7 229 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 MMGT1Q8N4V1 131 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 SLC30A5Q8TAD4 765 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 LNX1Q8TBB1 728 aaPredicted RBP11.59□□□□□ -0.55
PKP4-206ENST00000452162 CEP170P1Q96L14 293 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 NTPCRQ9BSD7 190 aaKnown RBP11.59□□□□□ -0.55
PKP4-206ENST00000452162 TUT1Q9H6E5 874 aaKnown RBP11.59□□□□□ -0.55
PKP4-206ENST00000452162 C17orf75Q9HAS0 396 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 EXOC7Q9UPT5 735 aa11.59□□□□□ -0.55
PKP4-206ENST00000452162 IGSF9BQ9UPX0 1349 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 CCDC169A6NNP5 214 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 ANKRD63C9JTQ0 380 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 PMM2O15305 246 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 ATG7O95352 703 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 ADRB2P07550 413 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 SUPT20HL2P0C7V6 817 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 ADSSP30520 456 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 SMTNP53814 917 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 PRKCEQ02156 737 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 FAM47CQ5HY64 1035 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 VPS36Q86VN1 386 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 KIFC3Q9BVG8 833 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 XPNPEP1Q9NQW7 623 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 RNF216Q9NWF9 866 aaPredicted RBP11.58□□□□□ -0.56
PKP4-206ENST00000452162 INTUQ9ULD6 942 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 L1RE1Q9UN81 338 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 USP20Q9Y2K6 914 aa11.58□□□□□ -0.56
PKP4-206ENST00000452162 FTCDO95954 541 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 CXCR5P32302 372 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 ANKRD33Q7Z3H0 272 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 FMNL3Q8IVF7 1028 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 FAM126BQ8IXS8 530 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 MCPH1Q8NEM0 835 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 PSMB7Q99436 277 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 TRPV6Q9H1D0 765 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 KMT5AQ9NQR1 393 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 ST7Q9NRC1 585 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 TRMT13Q9NUP7 481 aaKnown RBP11.57□□□□□ -0.56
PKP4-206ENST00000452162 DENND3A2RUS2 1198 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 B4GALT4O60513 344 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 LGR5O75473 907 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 DGAT1O75907 488 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 MARK3P27448 753 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 GABPB1Q06547 395 aaPredicted RBP11.57□□□□□ -0.56
PKP4-206ENST00000452162 FAAP100Q0VG06 881 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 MIS18BP1Q6P0N0 1132 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 SLC39A4Q6P5W5 647 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 DNAAF5Q86Y56 855 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 LRRC57Q8N9N7 239 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 SPATA4Q8NEY3 305 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 GLG1Q92896 1179 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 TOX2Q96NM4 488 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 KATNAL1Q9BW62 490 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 RNPEPQ9H4A4 650 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 CYP26B1Q9NR63 512 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 EHD2Q9NZN4 543 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 SEPT9Q9UHD8 586 aaPredicted RBP11.57□□□□□ -0.56
PKP4-206ENST00000452162 ZMYND8Q9ULU4 1186 aaPredicted RBP11.57□□□□□ -0.56
PKP4-206ENST00000452162 ADGRA3Q8IWK6 1321 aa11.57□□□□□ -0.56
PKP4-206ENST00000452162 IGKV6D-21A0A0A0MT36 114 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 A0A0A6YYK5 440 aaPredicted RBP11.56□□□□□ -0.56
PKP4-206ENST00000452162 DCDC2CA8MYV0 355 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 H2AFZP0C0S5 128 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 SYN1P17600 705 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 MCM3P25205 808 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 GCLMP48507 274 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 HIC1Q14526 733 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 H2AFVQ71UI9 128 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 CBWD2Q8IUF1 395 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 ARHGEF19Q8IW93 802 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 FBXL18Q96ME1 805 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 TMEM117Q9H0C3 514 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 SMARCAD1Q9H4L7 1026 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 ATP6V0A4Q9HBG4 840 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 SMARCAL1Q9NZC9 954 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 MROH7Q68CQ1 1323 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms