RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 GALCP54803 685 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 DNTTIP2Q5QJE6 756 aaKnown RBP7.13□□□□□ -1.27
USP46-202ENST00000451218 LIMS2Q7Z4I7 341 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 SCFD2Q8WU76 684 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 TMEM40Q8WWA1 233 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 PDE11AQ9HCR9 933 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.13□□□□□ -1.27
USP46-202ENST00000451218 CYTH4Q9UIA0 394 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 JRKLQ9Y4A0 524 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 LTBP2Q14767 1821 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 CES2O00748 559 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 EXOC3O60645 756 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 CETPP11597 493 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 RFX1P22670 979 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 COPB2P35606 906 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 MARCKSL1P49006 195 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 ACOT2P49753 483 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 PTENP60484 403 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 GCNT1Q02742 428 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 POU5F1BQ06416 359 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 ASIC2Q16515 512 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 WHAMMP3Q1A5X7 153 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 ZNF568Q3ZCX4 644 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 SLC9C1Q4G0N8 1177 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 PPP1R15BQ5SWA1 713 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 TRMT1LQ7Z2T5 733 aaKnown RBP7.13□□□□□ -1.27
USP46-202ENST00000451218 SLC17A8Q8NDX2 589 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 SECISBP2LQ93073 1101 aaKnown RBP7.13□□□□□ -1.27
USP46-202ENST00000451218 WNT8BQ93098 351 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 TRIM7Q9C029 511 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 PDZD7Q9H5P4 517 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 LRRC4CQ9HCJ2 640 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 MYADML2A6NDP7 307 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 A6NJR5 290 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 CYP1A2P05177 515 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 ARHGAP29Q52LW3 1261 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 ZPBP2Q6X784 338 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 OTUD6AQ7L8S5 288 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 MMGT1Q8N4V1 131 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 PIK3R5Q8WYR1 880 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 FAM213AQ9BRX8 229 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 VTA1Q9NP79 307 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 RAB20Q9NX57 234 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 SLC5A4Q9NY91 659 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 L1RE1Q9UN81 338 aa7.13□□□□□ -1.27
USP46-202ENST00000451218 AGPSO00116 658 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 GABBR2O75899 941 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 F2P00734 622 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 CYP11B1P15538 503 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 IGFBP6P24592 240 aaPredicted RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 MARK3P27448 753 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 KLHL30Q0D2K2 578 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 DUSP28Q4G0W2 176 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 CCSAPQ6IQ19 270 aaPredicted RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 RUFY4Q6ZNE9 571 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 MON1BQ7L1V2 547 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 BRSK2Q8IWQ3 736 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 RBM12Q9NTZ6 932 aaKnown RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 PUF60Q9UHX1 559 aaKnown RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 FARP1Q9Y4F1 1045 aaPredicted RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 O00370 1275 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 KIF5CO60282 957 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 TMEM253P0C7T8 217 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 OSBPP22059 807 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 CXCR5P32302 372 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 CLCN3P51790 818 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 CHMP4BP1P59074 171 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 IRF5Q13568 498 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 AADACL2Q6P093 401 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 ALKBH5Q6P6C2 394 aaKnown RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 KIAA0319LQ8IZA0 1049 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 PPP1R13LQ8WUF5 828 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 SPATA33Q96N06 139 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 CGRRF1Q99675 332 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 AGPAT1Q99943 283 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 ERVK-5Q9HDB9 667 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 CHORDC1Q9UHD1 332 aaPredicted RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 DMGDHQ9UI17 866 aaKnown RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 KIAA1671Q9BY89 1806 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 COL1A2P08123 1366 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 CELF2O95319 508 aaKnown RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 CYP3A5P20815 502 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 C2orf54Q08AI8 447 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 ZBTB6Q15916 424 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 ARTNQ5T4W7 220 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 KRT39Q6A163 491 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 MTHFD1LQ6UB35 978 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 ZNF397Q8NF99 534 aaPredicted RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 AENQ8WTP8 325 aaKnown RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 BCO2Q9BYV7 579 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 TSGA10Q9BZW7 698 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 TTC7AQ9ULT0 858 aaPredicted RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 FRMD4BQ9Y2L6 1034 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 ZSCAN5CA6NGD5 496 aaPredicted RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 H3BQF6 201 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 BUB1BO60566 1050 aaPredicted RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 FTCDO95954 541 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 TXNP10599 105 aaKnown RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 TNFRSF8P28908 595 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 MAGEA1P43355 309 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms