RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SMAD3P84022 425 aaKnown RBP14.18□□□□□ -0.14
VPS33A-202ENST00000451053 BTG3Q14201 252 aaPredicted RBP14.18□□□□□ -0.14
VPS33A-202ENST00000451053 GLRA4Q5JXX5 417 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 ANKRD40Q6AI12 368 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 ALKAL1Q6UXT8 129 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 LRRC55Q6ZSA7 311 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 CBWD2Q8IUF1 395 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 XXYLT1Q8NBI6 393 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 URGCPQ8TCY9 931 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 FBXL18Q96ME1 805 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 NKX2-4Q9H2Z4 354 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 RPF1Q9H9Y2 349 aaKnown RBP14.18□□□□□ -0.14
VPS33A-202ENST00000451053 TOPORSQ9NS56 1045 aaPredicted RBP14.18□□□□□ -0.14
VPS33A-202ENST00000451053 TBC1D13Q9NVG8 400 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 DMAC2Q9NW81 257 aa14.18□□□□□ -0.14
VPS33A-202ENST00000451053 MRPL42Q9Y6G3 142 aaKnown RBP14.18□□□□□ -0.14
VPS33A-202ENST00000451053 RALGAPA2Q2PPJ7 1873 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 TTC26A0AVF1 554 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 LINC01553A4QN01 128 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 SMTNL1A8MU46 457 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 BECN2A8MW95 431 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 LACTBL1A8MY62 500 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 SOX1O00570 391 aaPredicted RBP14.17□□□□□ -0.14
VPS33A-202ENST00000451053 B4GALT3O60512 393 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 POMCP01189 267 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 NR2F2P24468 414 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 DNAJB2P25686 324 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 CASP4P49662 377 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 STX17P56962 302 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 SPAG1Q07617 926 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 PAK1Q13153 545 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 RAB30Q15771 203 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 NFIL3Q16649 462 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 EDRF1Q3B7T1 1238 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 XKR4Q5GH76 650 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 TTI2Q6NXR4 508 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 C11orf57Q6ZUT1 292 aaPredicted RBP14.17□□□□□ -0.14
VPS33A-202ENST00000451053 SPRED2Q7Z698 418 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 SLC9A9Q8IVB4 645 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 BRSK2Q8IWQ3 736 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 LRRC43Q8N309 656 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 RDH13Q8NBN7 331 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 TMEM174Q8WUU8 243 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 FAM212AQ96EL1 285 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 EEF2KMTQ96G04 330 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 ZMAT2Q96NC0 199 aaKnown RBP14.17□□□□□ -0.14
VPS33A-202ENST00000451053 MED15Q96RN5 788 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 RPS6KC1Q96S38 1066 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 TSG101Q99816 390 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 CWH43Q9H720 699 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 CNTN3Q9P232 1028 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 MSRAQ9UJ68 235 aa14.17□□□□□ -0.14
VPS33A-202ENST00000451053 SMIM28A0A1B0GU29 152 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 BICDL2A1A5D9 508 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 GOLGA6L19H0YKK7 550 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 EXOC3O60645 756 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 LINC00271P0C7V0 271 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 TPM4P67936 248 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 LRRC63Q05C16 580 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 PPP2R3AQ06190 1150 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 GRIK3Q13003 919 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 SNRNP35Q16560 246 aaKnown RBP14.16□□□□□ -0.14
VPS33A-202ENST00000451053 GAS2L3Q86XJ1 694 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 ZNF280BQ86YH2 543 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 FIBCD1Q8N539 461 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 PPP1R10Q96QC0 940 aaKnown RBP14.16□□□□□ -0.14
VPS33A-202ENST00000451053 DUSP9Q99956 384 aaKnown RBP14.16□□□□□ -0.14
VPS33A-202ENST00000451053 MRPL9Q9BYD2 267 aaKnown RBP14.16□□□□□ -0.14
VPS33A-202ENST00000451053 PLEKHA5Q9HAU0 1116 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 CBX8Q9HC52 389 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 KIAA1586Q9HCI6 787 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 RBAKQ9NYW8 714 aaPredicted RBP14.16□□□□□ -0.14
VPS33A-202ENST00000451053 RWDD2AQ9UIY3 292 aa14.16□□□□□ -0.14
VPS33A-202ENST00000451053 KIAA1671Q9BY89 1806 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 CITO14578 2027 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 ANK1P16157 1881 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 ZNF233A6NK53 670 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 IKBKBO14920 756 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 DDHD2O94830 711 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 NFICP08651 508 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 KCNE1P15382 129 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 RPL13P26373 211 aaKnown RBP14.15□□□□□ -0.14
VPS33A-202ENST00000451053 MYL5Q02045 173 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 TAP1Q03518 808 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 RNASELQ05823 741 aaKnown RBP14.15□□□□□ -0.14
VPS33A-202ENST00000451053 ADAM9Q13443 819 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 MYBPC2Q14324 1141 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 NAB2Q15742 525 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 CEP135Q66GS9 1140 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 JADE1Q6IE81 842 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 ZC3H3Q8IXZ2 948 aaKnown RBP14.15□□□□□ -0.14
VPS33A-202ENST00000451053 TMEM130Q8N3G9 435 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 RSPH1Q8WYR4 309 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 NRDE2Q9H7Z3 1164 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 PDE11AQ9HCR9 933 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 KANSL3Q9P2N6 904 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 DNAJB4Q9UDY4 337 aa14.15□□□□□ -0.14
VPS33A-202ENST00000451053 TRIP11Q15643 1979 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 PDCD11Q14690 1871 aaKnown RBP14.14□□□□□ -0.15
VPS33A-202ENST00000451053 TDRD15B5MCY1 1934 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms